Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SNORA81-201ENST00000408493 178 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.71□□□□□ -1.5
CHRNA1P02708 AL354766.1-201ENST00000423396 542 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 AC009784.1-201ENST00000426484 460 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 NDUFB4P8-201ENST00000435351 367 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 NDUFA5P8-201ENST00000449019 346 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 RNU7-157P-201ENST00000459600 66 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 RN7SL860P-201ENST00000473738 223 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.71□□□□□ -1.5
CHRNA1P02708 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.71□□□□□ -1.5
CHRNA1P02708 AC079064.1-201ENST00000528365 362 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.71□□□□□ -1.5
CHRNA1P02708 CR383656.6-201ENST00000550518 394 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.71□□□□□ -1.5
CHRNA1P02708 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA1P02708 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA1P02708 AC008814.1-201ENST00000603797 406 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.71□□□□□ -1.5
CHRNA1P02708 AP005131.7-201ENST00000610087 611 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA1P02708 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA1P02708 IRF5P1-201ENST00000504852 2164 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CHRNA1P02708 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.71□□□□□ -1.5
CHRNA1P02708 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA1P02708 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA1P02708 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA1P02708 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA1P02708 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA1P02708 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
CHRNA1P02708 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA1P02708 AC012618.3-205ENST00000637896 1496 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CHRNA1P02708 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CHRNA1P02708 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA1P02708 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.7□□□□□ -1.5
CHRNA1P02708 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.7□□□□□ -1.5
CHRNA1P02708 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA1P02708 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA1P02708 OR8V1P-201ENST00000395193 873 ntBASIC5.7□□□□□ -1.5
CHRNA1P02708 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CHRNA1P02708 RN7SKP114-201ENST00000410327 279 ntBASIC5.7□□□□□ -1.5
CHRNA1P02708 COX6B1P1-201ENST00000415962 213 ntBASIC5.7□□□□□ -1.5
CHRNA1P02708 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.7□□□□□ -1.5
CHRNA1P02708 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.7□□□□□ -1.5
CHRNA1P02708 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA1P02708 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.7□□□□□ -1.5
CHRNA1P02708 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA1P02708 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA1P02708 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.7□□□□□ -1.5
CHRNA1P02708 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA1P02708 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.7□□□□□ -1.5
CHRNA1P02708 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA1P02708 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA1P02708 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA1P02708 AC090286.3-201ENST00000573133 187 ntBASIC5.7□□□□□ -1.5
CHRNA1P02708 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.7□□□□□ -1.5
CHRNA1P02708 AL139124.1-201ENST00000609123 421 ntBASIC5.7□□□□□ -1.5
CHRNA1P02708 uc_338.18-201ENST00000615451 175 ntBASIC5.7□□□□□ -1.5
CHRNA1P02708 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA1P02708 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA1P02708 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CHRNA1P02708 AC007996.1-201ENST00000620414 2821 ntBASIC5.7□□□□□ -1.5
CHRNA1P02708 AL360270.2-201ENST00000562952 5985 ntBASIC5.7□□□□□ -1.5
CHRNA1P02708 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.69□□□□□ -1.5
CHRNA1P02708 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CHRNA1P02708 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
CHRNA1P02708 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA1P02708 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 AL353625.1-202ENST00000366273 571 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 RNA5SP87-201ENST00000384155 118 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 RNU6-167P-201ENST00000384292 106 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CHRNA1P02708 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 CHEK2P3-201ENST00000416118 248 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA1P02708 USP9YP9-201ENST00000429406 715 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 AC008072.1-201ENST00000434254 824 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.69□□□□□ -1.5
CHRNA1P02708 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA1P02708 CEACAMP9-201ENST00000442990 513 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.69□□□□□ -1.5
CHRNA1P02708 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.69□□□□□ -1.5
CHRNA1P02708 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA1P02708 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNA1P02708 AC108043.1-201ENST00000512696 574 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 AL671862.1-201ENST00000515851 349 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 OR4A17P-201ENST00000526032 904 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA1P02708 AC137768.1-201ENST00000549998 553 ntBASIC5.69□□□□□ -1.5
CHRNA1P02708 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.69□□□□□ -1.5
CHRNA1P02708 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms