Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 OR8G7P-201ENST00000616658 848 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 REV3L-214ENST00000619481 969 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AL136228.1-201ENST00000622221 319 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC129915.3-201ENST00000634128 948 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 SALL4P2-201ENST00000423288 2910 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC004386.1-201ENST00000393214 761 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC099535.1-201ENST00000408928 371 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 CYCSP10-201ENST00000417973 294 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 TMBIM7P-201ENST00000418074 855 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AL034379.1-201ENST00000423216 253 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AL356981.1-201ENST00000454879 684 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 RPL21P6-201ENST00000479171 504 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 RN7SL57P-201ENST00000493687 290 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 ENPP7P9-201ENST00000514456 627 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC134698.5-201ENST00000519444 336 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 IGKV3D-25-201ENST00000519599 235 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC025857.1-201ENST00000525252 377 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC027369.2-201ENST00000528030 440 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 TOMM20P1-201ENST00000534518 427 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 DCN-210ENST00000547568 823 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 HSPE1P2-201ENST00000554777 306 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AP005119.1-201ENST00000580956 292 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC005244.1-201ENST00000582566 339 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AP000919.1-201ENST00000582850 985 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AP001542.1-201ENST00000591314 200 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AL121890.2-201ENST00000617644 465 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC129778.1-202ENST00000623812 261 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AL591379.1-207ENST00000635982 261 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AMYH02020865.1-205ENST00000636189 261 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 AC092111.2-201ENST00000611627 1414 ntBASIC3.92□□□□□ -1.78
HLA-DQA1P01909 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQA1P01909 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQA1P01909 AC011503.2-201ENST00000594230 1500 ntBASIC3.91□□□□□ -1.78
HLA-DQA1P01909 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms