Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 GAPDHP62-201ENST00000515313 990 ntBASIC5.05□□□□□ -1.6
ZIC3O60481 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.05□□□□□ -1.6
ZIC3O60481 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.05□□□□□ -1.6
ZIC3O60481 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.05□□□□□ -1.6
ZIC3O60481 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.05□□□□□ -1.6
ZIC3O60481 FAM106CP-201ENST00000582212 507 ntBASIC5.05□□□□□ -1.6
ZIC3O60481 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.05□□□□□ -1.6
ZIC3O60481 AC010245.2-201ENST00000606908 1167 ntBASIC5.05□□□□□ -1.6
ZIC3O60481 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ZIC3O60481 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ZIC3O60481 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.05□□□□□ -1.6
ZIC3O60481 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ZIC3O60481 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
ZIC3O60481 AC239868.2-201ENST00000564237 4527 ntBASIC5.05□□□□□ -1.6
ZIC3O60481 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZIC3O60481 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZIC3O60481 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
ZIC3O60481 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZIC3O60481 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
ZIC3O60481 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZIC3O60481 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ZIC3O60481 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZIC3O60481 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
ZIC3O60481 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.04□□□□□ -1.6
ZIC3O60481 AL121886.1-201ENST00000358609 435 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.04□□□□□ -1.6
ZIC3O60481 RNA5SP132-201ENST00000364725 118 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 RNU6-796P-201ENST00000391086 107 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.04□□□□□ -1.6
ZIC3O60481 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZIC3O60481 TMEM183AP1-205ENST00000432739 290 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 OR6D1P-201ENST00000436165 939 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 AC006994.1-201ENST00000438212 839 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.04□□□□□ -1.6
ZIC3O60481 RPL5P13-201ENST00000462840 709 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 AC104982.1-201ENST00000478775 574 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 ATP5LP5-201ENST00000483050 299 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.04□□□□□ -1.6
ZIC3O60481 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.04□□□□□ -1.6
ZIC3O60481 PRELID3BP6-201ENST00000503839 571 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZIC3O60481 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.04□□□□□ -1.6
ZIC3O60481 RNA5SP362-201ENST00000516048 118 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZIC3O60481 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.04□□□□□ -1.6
ZIC3O60481 PMS2P3-207ENST00000529061 717 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.04□□□□□ -1.6
ZIC3O60481 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.04□□□□□ -1.6
ZIC3O60481 AC104229.1-201ENST00000561364 255 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
ZIC3O60481 AC124283.4-201ENST00000581815 456 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.04□□□□□ -1.6
ZIC3O60481 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZIC3O60481 AL121652.1-201ENST00000608851 448 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.04□□□□□ -1.6
ZIC3O60481 AL359513.1-201ENST00000614364 557 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.04□□□□□ -1.6
ZIC3O60481 RPL23AP61-201ENST00000623642 466 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 MTND5P23-201ENST00000430812 1655 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 AC245100.2-201ENST00000454544 1679 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.04□□□□□ -1.6
ZIC3O60481 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.04□□□□□ -1.6
ZIC3O60481 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.04□□□□□ -1.6
ZIC3O60481 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
ZIC3O60481 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.04□□□□□ -1.6
ZIC3O60481 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.04□□□□□ -1.6
ZIC3O60481 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.04□□□□□ -1.6
ZIC3O60481 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZIC3O60481 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.04□□□□□ -1.6
ZIC3O60481 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZIC3O60481 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZIC3O60481 MT-RNR2-201ENST00000387347 1559 ntBASIC5.04□□□□□ -1.6
ZIC3O60481 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZIC3O60481 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.03□□□□□ -1.6
ZIC3O60481 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.03□□□□□ -1.6
ZIC3O60481 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.03□□□□□ -1.6
ZIC3O60481 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.03□□□□□ -1.6
ZIC3O60481 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZIC3O60481 AC011503.2-201ENST00000594230 1500 ntBASIC5.03□□□□□ -1.6
ZIC3O60481 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZIC3O60481 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
ZIC3O60481 AC008432.1-201ENST00000615912 1320 ntBASIC5.03□□□□□ -1.6
ZIC3O60481 AL627171.1-201ENST00000618845 1308 ntBASIC5.03□□□□□ -1.6
ZIC3O60481 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZIC3O60481 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.03□□□□□ -1.6
ZIC3O60481 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ZIC3O60481 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ZIC3O60481 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZIC3O60481 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZIC3O60481 MIR551A-201ENST00000385042 96 ntBASIC5.03□□□□□ -1.6
ZIC3O60481 MIR323B-201ENST00000385269 82 ntBASIC5.03□□□□□ -1.6
ZIC3O60481 OR3A2-201ENST00000408891 1076 ntBASIC5.03□□□□□ -1.6
ZIC3O60481 VN1R51P-201ENST00000411675 945 ntBASIC5.03□□□□□ -1.6
ZIC3O60481 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.03□□□□□ -1.6
ZIC3O60481 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.03□□□□□ -1.6
ZIC3O60481 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.03□□□□□ -1.6
ZIC3O60481 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.03□□□□□ -1.6
ZIC3O60481 AC106883.1-201ENST00000418805 562 ntBASIC5.03□□□□□ -1.6
ZIC3O60481 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms