Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.54□□□□□ -1.52
SMAD6O43541 SSR1P2-201ENST00000415208 787 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 OR13Z1P-201ENST00000416141 834 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.54□□□□□ -1.52
SMAD6O43541 VN1R37P-201ENST00000419096 748 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 RIMKLBP2-201ENST00000424737 654 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AC092447.3-201ENST00000426027 686 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 BX276092.6-201ENST00000430476 250 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 AL606490.1-201ENST00000452266 765 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 BX276092.8-201ENST00000455722 250 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 RN7SL214P-201ENST00000487317 265 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.54□□□□□ -1.52
SMAD6O43541 AC024558.1-201ENST00000505008 528 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AC113398.2-201ENST00000507630 558 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 MTND6P2-201ENST00000512226 524 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.54□□□□□ -1.52
SMAD6O43541 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.54□□□□□ -1.52
SMAD6O43541 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.54□□□□□ -1.52
SMAD6O43541 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.54□□□□□ -1.52
SMAD6O43541 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.54□□□□□ -1.52
SMAD6O43541 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.54□□□□□ -1.52
SMAD6O43541 AC009237.13-201ENST00000603193 276 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AC022387.2-201ENST00000604050 448 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AL158050.2-201ENST00000605336 568 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AC034236.3-201ENST00000605999 461 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMAD6O43541 RNA5SP439-201ENST00000617595 124 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AL162233.1-201ENST00000620014 944 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AC006840.1-201ENST00000623069 542 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 MTCO1P1-201ENST00000624263 1081 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.54□□□□□ -1.52
SMAD6O43541 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.54□□□□□ -1.52
SMAD6O43541 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMAD6O43541 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SMAD6O43541 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.54□□□□□ -1.52
SMAD6O43541 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMAD6O43541 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SMAD6O43541 NLRP3P1-201ENST00000622303 1785 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 AC140134.1-201ENST00000511830 3544 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.54□□□□□ -1.52
SMAD6O43541 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SMAD6O43541 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SMAD6O43541 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMAD6O43541 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMAD6O43541 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMAD6O43541 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMAD6O43541 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMAD6O43541 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMAD6O43541 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMAD6O43541 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMAD6O43541 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SMAD6O43541 UBE2V1P15-201ENST00000407776 448 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.53□□□□□ -1.52
SMAD6O43541 AL133325.1-201ENST00000421090 382 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 AL590623.1-201ENST00000427864 105 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 GSTM5P1-201ENST00000434751 660 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 NPM1P19-201ENST00000450070 712 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.53□□□□□ -1.52
SMAD6O43541 RPS3AP6-201ENST00000484430 795 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 AC092902.1-201ENST00000486999 259 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMAD6O43541 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.53□□□□□ -1.52
SMAD6O43541 AC025768.1-201ENST00000510057 267 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 CCNHP1-201ENST00000513311 678 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.53□□□□□ -1.52
SMAD6O43541 SNORA70.11-201ENST00000515987 138 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 SNORA70.13-201ENST00000516116 138 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 SCARNA16.4-201ENST00000516956 187 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 Y_RNA.717-201ENST00000517106 92 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.53□□□□□ -1.52
SMAD6O43541 AP004607.2-201ENST00000533949 322 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.53□□□□□ -1.52
SMAD6O43541 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.53□□□□□ -1.52
SMAD6O43541 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.53□□□□□ -1.52
SMAD6O43541 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMAD6O43541 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.53□□□□□ -1.52
SMAD6O43541 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.53□□□□□ -1.52
SMAD6O43541 BNIP3P38-201ENST00000601117 544 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 SUMO2P15-201ENST00000604285 278 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 AC015712.7-201ENST00000615211 635 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 AC140725.3-201ENST00000616193 880 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 AC109583.2-201ENST00000617367 129 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 MIR6837-201ENST00000620884 64 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 AC010608.3-201ENST00000625048 527 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 SAMMSON-209ENST00000641222 1100 ntBASIC5.53□□□□□ -1.52
SMAD6O43541 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMAD6O43541 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.53□□□□□ -1.52
SMAD6O43541 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SMAD6O43541 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms