Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SDCBPO00560 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SDCBPO00560 AC007996.1-201ENST00000620414 2821 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.32□□□□□ -1.72
SDCBPO00560 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SDCBPO00560 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SDCBPO00560 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.32□□□□□ -1.72
SDCBPO00560 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.32□□□□□ -1.72
SDCBPO00560 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SDCBPO00560 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SDCBPO00560 RNU1-74P-201ENST00000384108 171 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SDCBPO00560 AC009804.1-201ENST00000400949 179 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 AL390774.1-201ENST00000411924 246 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.32□□□□□ -1.72
SDCBPO00560 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.32□□□□□ -1.72
SDCBPO00560 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.32□□□□□ -1.72
SDCBPO00560 AC144530.1-201ENST00000452862 555 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 AL356981.1-201ENST00000454879 684 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 AC091180.1-201ENST00000462104 372 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.32□□□□□ -1.72
SDCBPO00560 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.32□□□□□ -1.72
SDCBPO00560 AC012400.1-201ENST00000518452 381 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.32□□□□□ -1.72
SDCBPO00560 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SDCBPO00560 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.32□□□□□ -1.72
SDCBPO00560 SNORD95-201ENST00000579879 68 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SDCBPO00560 BNIP3P41-202ENST00000616656 861 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.32□□□□□ -1.72
SDCBPO00560 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
SDCBPO00560 AC126323.6-202ENST00000568092 3511 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SDCBPO00560 AC092747.4-201ENST00000620519 1861 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SDCBPO00560 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SDCBPO00560 KARSP1-201ENST00000451871 1752 ntBASIC4.32□□□□□ -1.72
SDCBPO00560 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SDCBPO00560 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SDCBPO00560 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SDCBPO00560 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SDCBPO00560 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SDCBPO00560 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SDCBPO00560 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
SDCBPO00560 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SDCBPO00560 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SDCBPO00560 AC104260.2-201ENST00000623551 3497 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SDCBPO00560 RNA5SP242-201ENST00000364171 118 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 RN7SKP15-201ENST00000364742 309 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SDCBPO00560 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SDCBPO00560 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.31□□□□□ -1.72
SDCBPO00560 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.31□□□□□ -1.72
SDCBPO00560 RPL36AP10-201ENST00000421785 322 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.31□□□□□ -1.72
SDCBPO00560 AL139148.1-201ENST00000427122 680 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.31□□□□□ -1.72
SDCBPO00560 RPL34P6-201ENST00000432390 345 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 RPS29P10-201ENST00000439197 166 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SDCBPO00560 AC023141.9-201ENST00000458734 412 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 RN7SL184P-201ENST00000488308 297 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 RPL7P51-201ENST00000490532 749 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 AC005412.2-201ENST00000492004 341 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 AL136038.1-201ENST00000497246 351 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 AC104109.1-201ENST00000498563 436 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.31□□□□□ -1.72
SDCBPO00560 RNU6-941P-201ENST00000516346 108 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 GTF2IP11-201ENST00000526931 420 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.31□□□□□ -1.72
SDCBPO00560 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.31□□□□□ -1.72
SDCBPO00560 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.31□□□□□ -1.72
SDCBPO00560 AC020978.7-201ENST00000575953 1187 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 RN7SL435P-201ENST00000584418 282 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.31□□□□□ -1.72
SDCBPO00560 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.31□□□□□ -1.72
SDCBPO00560 AC079395.2-201ENST00000610982 737 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 AL512356.3-201ENST00000623005 461 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 CYP4F35P-202ENST00000636121 390 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SDCBPO00560 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SDCBPO00560 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SDCBPO00560 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SDCBPO00560 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.31□□□□□ -1.72
SDCBPO00560 AP001642.1-201ENST00000624727 2117 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SDCBPO00560 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.31□□□□□ -1.72
SDCBPO00560 MTCO1P7-201ENST00000419523 1542 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.31□□□□□ -1.72
SDCBPO00560 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SDCBPO00560 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.31□□□□□ -1.72
SDCBPO00560 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
SDCBPO00560 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.3□□□□□ -1.72
SDCBPO00560 OR55B1P-203ENST00000641518 2602 ntBASIC4.3□□□□□ -1.72
SDCBPO00560 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SDCBPO00560 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.3□□□□□ -1.72
SDCBPO00560 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms