Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC188H7C350 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC188H7C350 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC188H7C350 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CCDC188H7C350 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CCDC188H7C350 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC188H7C350 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 RN7SKP28-201ENST00000364770 305 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCDC188H7C350 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 EEF1B2P8-201ENST00000414101 671 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC188H7C350 MTCYBP7-201ENST00000419540 1134 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 SRSF1P1-201ENST00000424058 520 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
CCDC188H7C350 NAP1L4P2-201ENST00000425958 899 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC188H7C350 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC188H7C350 GSTM5P1-201ENST00000434751 660 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC188H7C350 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC188H7C350 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC188H7C350 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC188H7C350 CCRL1P1-201ENST00000449542 1053 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 AP006222.1-205ENST00000450734 457 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC188H7C350 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC188H7C350 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC188H7C350 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC188H7C350 AC074029.2-201ENST00000551045 634 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC188H7C350 RBM22P12-201ENST00000567098 1255 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 FAM106CP-201ENST00000582212 507 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 RN7SL435P-201ENST00000584418 282 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 AC108359.1-201ENST00000616451 1211 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 AC037198.3-201ENST00000616754 526 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC188H7C350 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC188H7C350 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC188H7C350 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC188H7C350 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC188H7C350 STX3-208ENST00000641815 3236 ntBASIC5.48□□□□□ -1.53
CCDC188H7C350 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC188H7C350 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC188H7C350 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC188H7C350 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC188H7C350 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC188H7C350 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC188H7C350 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC188H7C350 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC188H7C350 OR5T3-201ENST00000303059 1023 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC188H7C350 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCDC188H7C350 RNU1-74P-201ENST00000384108 171 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 SNORA16A-201ENST00000384342 137 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 MIR1275-201ENST00000408770 80 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC188H7C350 OR5M12P-201ENST00000423388 929 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 DSTNP5-201ENST00000427921 523 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 KCTD9P1-201ENST00000430462 1167 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 TRIM60P13-201ENST00000432350 1283 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC188H7C350 FTLP19-201ENST00000433300 394 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 CLUHP1-201ENST00000435012 1190 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AL157884.3-201ENST00000448273 1184 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC188H7C350 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC188H7C350 ASNSP4-201ENST00000511103 447 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AC060775.1-201ENST00000518241 520 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AC026616.1-201ENST00000523157 525 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 AC006512.2-201ENST00000543250 486 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC188H7C350 AL135786.2-201ENST00000608422 615 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 AL451049.1-201ENST00000608672 497 ntBASIC5.47□□□□□ -1.53
CCDC188H7C350 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC188H7C350 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms