Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 HSFY3P-201ENST00000444242 1191 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC097499.1-201ENST00000444277 208 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 RPL36AP39-201ENST00000445859 318 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 HSPE1P22-201ENST00000456856 327 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 CCDC11P1-201ENST00000503137 1162 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 RNU6-1308P-201ENST00000516817 103 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC104417.1-201ENST00000523974 751 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 OR4A6P-201ENST00000534364 970 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 RPA2P1-201ENST00000556557 721 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 MTND3P13-201ENST00000574391 343 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC024060.1-201ENST00000607052 494 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC108673.3-201ENST00000609183 335 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC096861.1-201ENST00000616652 240 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AP004607.9-201ENST00000618202 316 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC069234.4-201ENST00000621276 412 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC005725.1-201ENST00000577346 2607 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 FUNDC2P3-201ENST00000334716 533 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 UBE2Q2P1-202ENST00000354771 883 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 U3.25-201ENST00000391209 220 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AL132875.1-201ENST00000403623 949 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 RN7SKP278-201ENST00000410504 342 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC010385.1-201ENST00000412374 256 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 MYL6P5-201ENST00000412707 459 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 BX510359.3-201ENST00000422168 306 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 PRUNEP1-201ENST00000425846 705 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 GTF2IP3-201ENST00000433887 494 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 DNAJC19P5-201ENST00000443295 316 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 MRPL35P2-201ENST00000448009 511 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC016027.4-201ENST00000450866 277 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 CFL1P4-201ENST00000451536 498 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 RPL7P45-201ENST00000455851 743 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC093166.2-201ENST00000455969 1017 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC023141.9-201ENST00000458734 412 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 RPS26P39-201ENST00000469206 341 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 RNA5SP303-201ENST00000516192 130 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC109635.6-201ENST00000525487 1113 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 NDUFS5P6-201ENST00000529136 295 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 OR8I1P-201ENST00000529291 931 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC087897.1-201ENST00000550134 156 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AL109741.3-201ENST00000561748 592 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC009097.3-201ENST00000563557 1018 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 SNORD95-201ENST00000579879 68 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AC008751.2-201ENST00000597885 980 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AL645933.2-201ENST00000606743 1207 ntBASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB1Q9Y5F3 AP002791.1-201ENST00000623291 381 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms