Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL133445.1-201ENST00000467051 452 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 RN7SL184P-201ENST00000488308 297 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 HMGB3P16-201ENST00000508037 287 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AC106872.4-201ENST00000510050 523 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 RNA5SP464-201ENST00000516251 108 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 EIF4EP5-201ENST00000528228 640 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 OR8G3P-201ENST00000533406 921 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AP004607.2-201ENST00000533949 322 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AL390334.1-201ENST00000556395 450 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AP000769.2-201ENST00000602344 396 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AC009027.1-201ENST00000604510 479 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AC005252.1-201ENST00000604518 1063 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AC007204.2-201ENST00000615022 616 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 MIR6837-201ENST00000620884 64 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AL049767.1-202ENST00000637826 242 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 RN7SKP160-201ENST00000363804 340 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AL390774.1-201ENST00000411924 246 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AL133325.1-201ENST00000421090 382 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 BTG3P1-201ENST00000435859 716 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC007386.1-201ENST00000455212 582 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 RN7SL423P-201ENST00000486202 304 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 YWHABP2-201ENST00000540201 713 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC079395.2-201ENST00000610982 737 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AL359513.1-201ENST00000614364 557 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC005840.5-201ENST00000619166 599 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 AC008079.2-201ENST00000623543 20396 ntBASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.82□□□□□ -1.64
TRAPPC4Q9Y296 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC123912.3-201ENST00000600907 1367 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 RN7SKP153-201ENST00000365026 316 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC013442.1-201ENST00000397347 228 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC093655.2-201ENST00000425735 631 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC124944.2-201ENST00000429866 1242 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC046176.1-201ENST00000435260 1170 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 RNA5SP362-201ENST00000516048 118 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC027026.1-201ENST00000532323 742 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC022884.2-201ENST00000578535 580 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC011840.5-201ENST00000582125 771 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC037198.3-201ENST00000616754 526 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms