Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 RPS4XP1-201ENST00000482189 787 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 RPS21P4-201ENST00000487122 248 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 RN7SL441P-201ENST00000492388 296 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 AL512310.9-201ENST00000553311 948 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 AC012146.2-201ENST00000576545 416 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 AP000648.2-201ENST00000624182 404 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 OR52B5P-202ENST00000641118 1110 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 MAPK10-338ENST00000641647 3362 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 NAMPTP1-201ENST00000440465 2514 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 MIR600-201ENST00000385007 98 ntBASIC5.12□□□□□ -1.59
TREX1Q9NSU2 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AC007738.1-201ENST00000413892 348 ntBASIC5.12□□□□□ -1.59
TREX1Q9NSU2 SLC35E1P1-201ENST00000419313 864 ntBASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AC104333.2-201ENST00000422630 192 ntBASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 RNU7-157P-201ENST00000459600 66 ntBASIC5.12□□□□□ -1.59
TREX1Q9NSU2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AP000859.1-201ENST00000525536 307 ntBASIC5.12□□□□□ -1.59
TREX1Q9NSU2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AC011445.2-201ENST00000599274 173 ntBASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AC095055.1-201ENST00000603472 1113 ntBASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AC074140.1-201ENST00000621617 208 ntBASIC5.12□□□□□ -1.59
TREX1Q9NSU2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 SAMMSON-213ENST00000641336 1521 ntBASIC5.12□□□□□ -1.59
TREX1Q9NSU2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TREX1Q9NSU2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AC100778.3-201ENST00000580060 1750 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AP005435.3-201ENST00000531260 3198 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 SNORA17.1-201ENST00000362945 126 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AC013442.1-201ENST00000397347 228 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 DUTP5-201ENST00000406790 469 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 GAPDHP34-201ENST00000432112 823 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 BX323845.1-201ENST00000432417 179 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AC245047.2-201ENST00000441060 530 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AL157385.1-201ENST00000446973 268 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AC009127.1-201ENST00000467090 155 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 RPL7P39-201ENST00000481157 744 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AC112184.1-201ENST00000505179 312 ntBASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.11□□□□□ -1.59
TREX1Q9NSU2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms