Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL355472.4-201ENST00000610233 626 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC103974.2-201ENST00000611319 778 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 TTR-205ENST00000613781 556 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 FOLR2-210ENST00000619261 1126 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 MIR6877-201ENST00000620452 64 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AC006504.8-201ENST00000621046 635 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AL359697.1-201ENST00000624879 587 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 CTBP1-219ENST00000629223 210 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 EEF1A1P6-201ENST00000434005 1384 ntBASIC9.48□□□□□ -0.89
RTN4Q9NQC3 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
RTN4Q9NQC3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 RNU1-146P-201ENST00000364015 165 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 SNORA58.1-201ENST00000364133 136 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 RPL7P60-201ENST00000397636 735 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 RPL36AP36-201ENST00000418616 301 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 PIGCP2-201ENST00000433617 835 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AC010967.3-201ENST00000438648 213 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AC140076.1-201ENST00000449897 361 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 LHFPL3-AS2-201ENST00000453666 923 ntTSL 3 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AMD1P1-201ENST00000457220 922 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 RPL29P11-201ENST00000494408 492 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AC011352.2-201ENST00000514574 1016 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 IGLVIV-53-201ENST00000520107 367 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 HIF1AP1-201ENST00000553642 175 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 OR1D5-201ENST00000575751 939 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AC015917.1-201ENST00000579654 510 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AC013290.1-201ENST00000586960 537 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 EIF1-207ENST00000591776 797 ntTSL 4 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AC010424.2-201ENST00000607594 443 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 RDM1-229ENST00000639942 420 ntTSL 5 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 AC007012.2-201ENST00000623206 1676 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
RTN4Q9NQC3 LINC01847-203ENST00000641163 1490 ntBASIC9.47□□□□□ -0.89
RTN4Q9NQC3 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
RTN4Q9NQC3 AC012213.2-201ENST00000562917 4597 ntBASIC9.46□□□□□ -0.89
RTN4Q9NQC3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC9.46□□□□□ -0.89
RTN4Q9NQC3 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
RTN4Q9NQC3 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC9.46□□□□□ -0.89
RTN4Q9NQC3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
RTN4Q9NQC3 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
RTN4Q9NQC3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC9.46□□□□□ -0.89
RTN4Q9NQC3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC9.46□□□□□ -0.89
RTN4Q9NQC3 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
RTN4Q9NQC3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AC097063.1-201ENST00000426714 1797 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 RNVU1-3-201ENST00000364313 161 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 CNN2P7-201ENST00000400583 932 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AL049697.2-201ENST00000403708 294 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 DMKN-205ENST00000414866 867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 RPS15AP12-201ENST00000419498 388 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 RPS15AP40-201ENST00000419621 391 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 ELOA-AS1-201ENST00000427796 1074 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 BX276092.7-201ENST00000433410 623 ntTSL 3 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 RPL14P5-201ENST00000436474 730 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AL158819.1-202ENST00000440645 447 ntTSL 2 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 FDX1P2-201ENST00000450769 375 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AC003666.1-201ENST00000454113 611 ntTSL 3 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 FTH1P4-201ENST00000480365 553 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 MEF2C-AS1-203ENST00000508718 483 ntTSL 4 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 OR5BC1P-201ENST00000529327 739 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms