Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 TRIM51GP-201ENST00000534741 1350 ntBASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 RN7SKP145-201ENST00000363291 303 ntBASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 RNU1-136P-201ENST00000384181 164 ntBASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 RNU1-106P-201ENST00000384382 164 ntBASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AL133388.1-201ENST00000404509 287 ntBASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AC018442.3-201ENST00000523025 183 ntBASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 MIR6798-201ENST00000612887 67 ntBASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AC131971.1-201ENST00000332881 1482 ntBASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF3Q9HD45 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC005005.4-201ENST00000623789 16698 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC103591.2-201ENST00000265259 766 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 RNA5SP443-201ENST00000363083 132 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 RNU1-43P-201ENST00000365052 165 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 SRSF1P1-201ENST00000424058 520 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 OR10T1P-201ENST00000424327 947 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AL596266.1-201ENST00000448132 400 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AL591363.1-201ENST00000450091 483 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 RPL7P61-201ENST00000451721 751 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AL389915.2-201ENST00000454576 441 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 HSPE1P22-201ENST00000456856 327 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 RN7SL97P-201ENST00000486780 299 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 SNRPCP2-201ENST00000504370 475 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 RNU6-941P-201ENST00000516346 108 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 SCARNA16.4-201ENST00000516956 187 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 PMS2P3-207ENST00000529061 717 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC060766.1-201ENST00000590824 627 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC133644.2-201ENST00000608142 540 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC009163.6-201ENST00000612367 342 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 MIR6133-201ENST00000617057 108 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC109583.2-201ENST00000617367 129 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC003985.2-201ENST00000562268 1669 ntBASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF3Q9HD45 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC092376.2-201ENST00000622621 4116 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 AC133552.1-201ENST00000569988 4007 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 MAPK10-328ENST00000641553 4009 ntBASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TM9SF3Q9HD45 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms