Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AL121594.2-201ENST00000541658 472 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AC025574.2-201ENST00000615621 514 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AP003485.1-201ENST00000625093 753 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 AL137058.3-201ENST00000624531 3099 ntBASIC5.76□□□□□ -1.49
EBF3Q9H4W6 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
EBF3Q9H4W6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC073429.2-201ENST00000569694 1444 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 RN7SKP6-201ENST00000364795 319 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 RN7SKP273-201ENST00000411392 314 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AL133325.1-201ENST00000421090 382 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC092447.3-201ENST00000426027 686 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 MEMO1P4-201ENST00000453590 386 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AL139824.2-201ENST00000458731 1095 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AP002371.1-201ENST00000463604 433 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC093827.1-201ENST00000480094 861 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 RPL15P21-201ENST00000495592 567 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 RN7SL808P-201ENST00000496066 299 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 MIR4311-201ENST00000580794 100 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC040174.2-201ENST00000602701 465 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC114878.2-201ENST00000604863 1251 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AL445222.1-201ENST00000607259 628 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC009032.1-201ENST00000617574 431 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AL049777.1-201ENST00000622740 518 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC010872.1-201ENST00000624225 675 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 OR4G3P-201ENST00000633500 913 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 CASC19-222ENST00000641321 1173 ntBASIC5.75□□□□□ -1.49
EBF3Q9H4W6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.75□□□□□ -1.49
EBF3Q9H4W6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AC007342.5-201ENST00000571340 2142 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 RNA5SP507-201ENST00000363603 121 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 MIR551A-201ENST00000385042 96 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AF228730.1-201ENST00000397972 663 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 OR1F12-201ENST00000402365 945 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 RPS27P18-201ENST00000431701 247 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 OR52B5P-201ENST00000435337 951 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AC074367.1-201ENST00000438685 1125 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AC245047.2-201ENST00000441060 530 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AL356390.1-201ENST00000455684 397 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 RPS3AP6-201ENST00000484430 795 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AC105233.1-201ENST00000498840 781 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 RPEP1-201ENST00000504507 658 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 MTND2P38-201ENST00000522536 667 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AC126177.5-201ENST00000549599 178 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AC104072.1-201ENST00000568817 668 ntBASIC5.74□□□□□ -1.49
EBF3Q9H4W6 AC040904.1-201ENST00000590850 223 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms