Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 IGLVIV-64-201ENST00000518581 301 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.8□□□□□ -1.64
SSX3Q99909 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SSX3Q99909 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC079600.1-201ENST00000550326 297 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 AC068714.1-201ENST00000559623 800 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.8□□□□□ -1.64
SSX3Q99909 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.8□□□□□ -1.64
SSX3Q99909 AC119403.2-201ENST00000590960 598 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.8□□□□□ -1.64
SSX3Q99909 uc_338.26-201ENST00000612659 160 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.8□□□□□ -1.64
SSX3Q99909 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.8□□□□□ -1.64
SSX3Q99909 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SSX3Q99909 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 HSPD1P11-201ENST00000508643 1702 ntBASIC4.8□□□□□ -1.64
SSX3Q99909 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.8□□□□□ -1.64
SSX3Q99909 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSX3Q99909 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX3Q99909 NEPNP-201ENST00000404786 1371 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX3Q99909 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX3Q99909 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX3Q99909 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX3Q99909 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX3Q99909 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX3Q99909 SELENOWP1-201ENST00000322792 252 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX3Q99909 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX3Q99909 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSX3Q99909 RN7SKP166-201ENST00000410812 305 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 AL354890.1-201ENST00000413730 346 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 RPL6P29-201ENST00000414863 865 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 PTCD2P2-201ENST00000415579 1095 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 CR848007.2-201ENST00000424918 787 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 AC126120.1-201ENST00000431082 470 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 AL445928.1-201ENST00000435545 222 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 RPL23AP19-201ENST00000436229 369 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 MTND6P18-201ENST00000439477 513 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 ELOCP10-201ENST00000440624 327 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 AC023271.1-201ENST00000445936 1090 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 ACA64.4-201ENST00000459070 127 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AC007998.1-201ENST00000474156 672 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 METTL15P1-201ENST00000481421 1045 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 RPL7P51-201ENST00000490532 749 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AC090543.1-201ENST00000492168 485 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 MTATP6P1-201ENST00000514057 681 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.79□□□□□ -1.64
SSX3Q99909 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX3Q99909 AC087272.1-201ENST00000523624 533 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.79□□□□□ -1.64
SSX3Q99909 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX3Q99909 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX3Q99909 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 MIR3614-201ENST00000581261 86 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.79□□□□□ -1.64
SSX3Q99909 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.79□□□□□ -1.64
SSX3Q99909 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX3Q99909 ELOCP34-201ENST00000604436 327 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.79□□□□□ -1.64
SSX3Q99909 AC015712.7-201ENST00000615211 635 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSX3Q99909 OR8G3P-202ENST00000641572 1255 ntBASIC4.79□□□□□ -1.64
SSX3Q99909 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSX3Q99909 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms