Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MTCO2P34-201ENST00000421994 607 ntBASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AL157884.1-201ENST00000424561 454 ntBASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 MTND1P32-201ENST00000433043 938 ntBASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 RPL7P41-201ENST00000485823 957 ntBASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AC087465.1-201ENST00000560574 245 ntBASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AC092332.1-201ENST00000563684 829 ntBASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AP000403.1-201ENST00000603349 851 ntBASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 CLPTM1LP1-201ENST00000604519 484 ntBASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 SDR42E1P1-201ENST00000611327 477 ntBASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 AL359314.1-201ENST00000616913 261 ntBASIC7.27□□□□□ -1.25
SYNGAP1Q96PV0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC241584.2-201ENST00000637142 2090 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC008957.3-201ENST00000624112 2242 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 RN7SKP162-201ENST00000363605 345 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 C1DP1-201ENST00000426049 402 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 RAC1P8-201ENST00000427086 527 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 MTCO1P19-201ENST00000443487 500 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 CDC27P1-201ENST00000445384 715 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 SEPT14P24-201ENST00000447236 180 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC233982.1-201ENST00000451247 436 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 MTCYBP1-201ENST00000454315 1119 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 RN7SL610P-201ENST00000463845 291 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC016687.1-201ENST00000482574 353 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC231760.1-201ENST00000498002 260 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC025458.1-201ENST00000506046 166 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 NBEAP1-201ENST00000554452 979 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC245505.1-201ENST00000556398 224 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 LINC00556-201ENST00000569603 412 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 MIR3176-201ENST00000582210 90 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 OR1S1-201ENST00000624470 978 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 AL357562.1-201ENST00000624911 609 ntBASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNGAP1Q96PV0 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC062029.1-202ENST00000606164 3651 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AL136531.3-201ENST00000624378 3658 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC005034.3-201ENST00000604845 1747 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC027279.1-201ENST00000568885 4284 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms