Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 RPS3P2-201ENST00000421346 701 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC114973.1-201ENST00000429057 632 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 Z80107.1-201ENST00000436830 412 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC107015.1-201ENST00000466902 747 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 OR7E157P-201ENST00000494376 911 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 TRAV31-201ENST00000502780 342 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 IGKV2-19-201ENST00000518132 283 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC139697.1-201ENST00000548429 745 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC084759.1-201ENST00000561168 290 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 NDUFA5P11-201ENST00000567995 343 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC091057.3-201ENST00000602684 733 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AL135786.2-201ENST00000608422 615 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC093388.1-201ENST00000609166 430 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 RN7SL544P-201ENST00000617232 284 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 MIR6778-201ENST00000617912 73 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 RN7SL763P-201ENST00000620922 284 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC007275.1-201ENST00000621243 671 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC008993.2-201ENST00000631744 806 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AC106872.5-201ENST00000508856 1416 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AL359715.4-201ENST00000606629 1436 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 AL022311.1-201ENST00000623726 19416 ntBASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.39□□□□□ -1.39
CDK5RAP3Q96JB5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC138907.8-201ENST00000623981 2256 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 OR13Z1P-201ENST00000416141 834 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 KCTD9P1-201ENST00000430462 1167 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AL138899.2-201ENST00000439139 499 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 SETP6-201ENST00000479329 568 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 LARP7P4-201ENST00000481075 878 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC073610.1-201ENST00000489971 396 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 HMGB1P42-201ENST00000532126 553 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC005034.4-201ENST00000603612 899 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC073137.1-201ENST00000605636 634 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AP001033.2-201ENST00000609701 1003 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AL365181.4-201ENST00000609800 547 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC006927.4-201ENST00000639187 543 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC013437.2-201ENST00000639587 677 ntBASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 AC106754.1-201ENST00000562632 1513 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms