Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL592429.1-201ENST00000403909 1473 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 NXF4-202ENST00000416098 1465 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 MTCO1P15-201ENST00000529569 1526 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 RNU6-236P-201ENST00000363886 106 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 RN7SKP78-201ENST00000364711 318 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 MIR1203-201ENST00000408812 85 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 RN7SKP29-201ENST00000410957 272 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 RN7SKP279-201ENST00000411383 298 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 OR2X1P-201ENST00000421144 687 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 ETF1P3-201ENST00000430422 1160 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AL035458.1-201ENST00000433096 585 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC023141.8-201ENST00000442554 208 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 DNAJC19P5-201ENST00000443295 316 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 Z83846.1-201ENST00000446798 265 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 RPL7P32-201ENST00000457119 744 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 RPS17P15-201ENST00000475609 349 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC006539.1-201ENST00000481419 501 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC099521.1-201ENST00000482557 334 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 RN7SL57P-201ENST00000493687 290 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 TRIM51DP-201ENST00000529746 596 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC091515.1-201ENST00000548110 679 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC145350.1-201ENST00000567426 208 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 MIR4420-201ENST00000583944 77 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC012254.4-201ENST00000588843 273 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AP002906.1-201ENST00000603405 233 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC079610.2-201ENST00000604818 690 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 MFSD8-239ENST00000641590 2479 ntBASIC5.45□□□□□ -1.54
CTHRC1Q96CG8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 PDZK1P1-202ENST00000425209 1350 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC245100.2-201ENST00000454544 1679 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC116158.1-201ENST00000560231 2129 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC233289.1-201ENST00000403700 508 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 RPS24P7-201ENST00000416921 246 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 MTCO3P4-201ENST00000419236 787 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 RPA2P2-201ENST00000419698 796 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 HIGD1AP4-201ENST00000430194 280 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 RPS6P15-201ENST00000431996 751 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 DEFA9P-201ENST00000433042 285 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 215.9 ms