Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SUGT1P2-201ENST00000379452 992 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 RPS6P23-201ENST00000413224 722 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 NENFP1-201ENST00000419476 466 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC066692.1-201ENST00000421721 457 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AL035660.1-201ENST00000422041 222 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 TMEM183AP1-205ENST00000432739 290 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 MOB1AP2-201ENST00000446060 614 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 COX6B1P2-201ENST00000489624 230 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC096571.1-202ENST00000506634 735 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 DUTP7-201ENST00000507982 486 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 HMGB1P47-201ENST00000511281 589 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC084759.1-201ENST00000561168 290 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 OOSP1P2-201ENST00000579644 351 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC091057.3-201ENST00000602684 733 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC112220.2-201ENST00000605513 533 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC006946.3-201ENST00000609791 756 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC073342.3-201ENST00000624211 193 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC103703.1-201ENST00000634783 663 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 OR4F13P-202ENST00000560066 2054 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AL031595.2-201ENST00000624215 19071 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 CR382285.2-201ENST00000624662 1495 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 GAPDHP24-201ENST00000328713 983 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 RN7SKP74-201ENST00000362849 309 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 RAB5CP1-201ENST00000395972 580 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 NPM1P38-201ENST00000403835 865 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 RNF10P1-201ENST00000418589 369 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 MTND2P21-201ENST00000436242 1042 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 NANOGP9-201ENST00000439890 892 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AL359265.1-201ENST00000440296 795 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 LINC02210-201ENST00000444561 288 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 RPL37P23-201ENST00000492641 294 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 C1DP5-201ENST00000525775 383 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AC122688.1-201ENST00000541494 223 ntBASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.19□□□□□ -1.58
CLIP4Q8N3C7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms