Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 Z95327.3-201ENST00000610385 572 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AL354696.1-201ENST00000614652 497 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AL121890.2-201ENST00000617644 465 ntBASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.98□□□□□ -1.61
NHLRC1Q6VVB1 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC005005.4-201ENST00000623789 16698 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 RAD1P1-201ENST00000231383 813 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC023490.2-201ENST00000359859 470 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 RNA5SP435-201ENST00000364044 108 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 SNORD115-48-201ENST00000364764 76 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 RNA5SP122-201ENST00000384457 108 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 GPS2P1-201ENST00000411761 986 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 RANP4-201ENST00000413361 655 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 RIMKLBP2-201ENST00000424737 654 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 MTND6P12-201ENST00000428247 522 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 TMEM183AP1-205ENST00000432739 290 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 NDUFB4P8-201ENST00000435351 367 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 MTND2P3-201ENST00000452458 470 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AP000547.1-201ENST00000454360 617 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AL035090.1-201ENST00000454835 332 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 RPS27AP2-201ENST00000457576 465 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC094085.1-201ENST00000468914 584 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC091912.1-201ENST00000511351 248 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 snoU109.6-201ENST00000516831 118 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC138832.1-201ENST00000522871 556 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 OR10D4P-201ENST00000525892 951 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 TRIM51DP-201ENST00000529746 596 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 OR5AM1P-201ENST00000532136 1032 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC021483.2-201ENST00000567415 758 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AP005131.7-201ENST00000610087 611 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 CU639417.4-201ENST00000623928 207 ntBASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NHLRC1Q6VVB1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
NHLRC1Q6VVB1 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms