Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL356490.1-201ENST00000623079 479 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AP001962.1-201ENST00000624114 559 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 MAPK10-304ENST00000641341 3984 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 CASC19-204ENST00000641001 2055 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AC002525.1-201ENST00000624392 1622 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
C11orf88Q6PI97 AL354854.1-201ENST00000455940 1363 ntBASIC5.04□□□□□ -1.6
C11orf88Q6PI97 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC093311.1-201ENST00000506586 2021 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 RN7SKP145-201ENST00000363291 303 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 RNU6-317P-201ENST00000384031 107 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 MIR323B-201ENST00000385269 82 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 GCNT1P4-201ENST00000404096 329 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 RPS4XP16-201ENST00000427198 791 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 CRIP1P1-201ENST00000427567 185 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 ZNF965P-201ENST00000432501 817 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC112492.2-201ENST00000432774 1030 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC094019.1-201ENST00000434678 472 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 PPIAP13-201ENST00000434706 478 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 CBX1P4-201ENST00000439415 457 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AL663074.2-201ENST00000440621 479 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 EIF5AP4-201ENST00000441206 465 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC239809.1-201ENST00000450470 217 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC006511.1-201ENST00000470614 315 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 OR4D12P-201ENST00000509361 911 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 PGBD4P4-201ENST00000509673 613 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AF186190.1-201ENST00000517470 480 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AP003396.4-201ENST00000527574 265 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AP004609.2-201ENST00000532177 190 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC090515.3-201ENST00000560431 315 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC092332.1-201ENST00000563684 829 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 RNU4ATAC-201ENST00000580972 127 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AL513327.3-201ENST00000602618 469 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC015849.2-201ENST00000605738 409 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AC096656.1-201ENST00000623826 1364 ntBASIC5.03□□□□□ -1.6
C11orf88Q6PI97 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms