Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AL451142.1-201ENST00000375867 775 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AL672167.2-201ENST00000377164 879 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 MT-RNR1-201ENST00000389680 954 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC245028.1-201ENST00000423259 256 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 MTCO1P51-201ENST00000427672 1060 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 RPL7P56-201ENST00000429441 717 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 NDUFA5P1-201ENST00000433858 341 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC114878.1-201ENST00000441166 358 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 BTBD7P2-201ENST00000441962 620 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 IGBP1P3-201ENST00000447449 1000 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 TRY2P-201ENST00000448860 689 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC092647.2-201ENST00000452998 253 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 RN7SL738P-201ENST00000470264 297 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 RN7SL205P-201ENST00000490174 284 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 RNA5SP373-201ENST00000517271 95 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 SUMO2P19-201ENST00000518920 295 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC104997.1-201ENST00000519761 717 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC134349.2-201ENST00000535136 910 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 RN7SL52P-201ENST00000584271 284 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 RN7SL722P-201ENST00000617780 284 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 RN7SL565P-201ENST00000618246 284 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AL731566.2-201ENST00000618971 317 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 NCOA4P2-201ENST00000340589 1813 ntBASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LYSMD4Q5XG99 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 RPL23AP17-201ENST00000401064 499 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 RAB28P1-201ENST00000411517 641 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 SEPT7P8-201ENST00000413308 775 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 COX6B1P1-201ENST00000415962 213 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 RIMKLBP2-201ENST00000424737 654 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 USP9YP9-201ENST00000429406 715 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 MTCO1P57-201ENST00000432182 261 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AL590399.4-201ENST00000436561 601 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC104634.1-201ENST00000452720 462 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 RPL12P39-201ENST00000455456 496 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 OR9N1P-201ENST00000491296 333 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC027281.1-201ENST00000574178 758 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 KATNBL1P1-201ENST00000605192 748 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC008833.1-201ENST00000611633 691 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 uc_338.18-201ENST00000615451 175 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 AC006213.5-201ENST00000619673 288 ntBASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
LYSMD4Q5XG99 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms