Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL138693.1-201ENST00000622219 129 ntBASIC5.75□□□□□ -1.49
RNF220Q5VTB9 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF220Q5VTB9 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC020633.1-201ENST00000468439 2247 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RN7SKP145-201ENST00000363291 303 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RNU6-353P-201ENST00000364266 108 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC007618.1-201ENST00000366455 732 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RNU6-224P-201ENST00000384055 107 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AP002530.1-201ENST00000405705 684 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RN7SKP121-201ENST00000410842 305 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 TAF13P2-201ENST00000416876 286 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AL360013.1-201ENST00000419031 858 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 MTCO3P21-201ENST00000430791 643 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 CDY14P-201ENST00000431260 1014 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 GAPDHP19-201ENST00000431768 1005 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 MTCYBP15-201ENST00000433123 1127 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 CDY12P-201ENST00000440679 1015 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RPS10P18-201ENST00000442662 495 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AL031681.1-201ENST00000443304 400 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 CDY13P-201ENST00000445813 1015 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC023271.1-201ENST00000445936 1090 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC022431.1-201ENST00000450941 438 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 CDY23P-201ENST00000451661 1014 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 OR2AF1P-201ENST00000454899 889 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RANP1-206ENST00000455094 651 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RPS27AP2-201ENST00000457576 465 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RPL7AP52-201ENST00000458096 790 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RNU7-140P-201ENST00000459546 60 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RN7SL197P-201ENST00000466981 299 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RPL12P31-201ENST00000478433 450 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC015524.1-201ENST00000491585 472 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 GM2AP2-201ENST00000491764 562 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 OR4D12P-201ENST00000509361 911 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 FTH1P11-201ENST00000517577 551 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 BCAS2P1-201ENST00000528022 632 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 TDGP1-201ENST00000543961 1229 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 MIR4732-201ENST00000581873 76 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC024267.2-201ENST00000582737 417 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 CLIC4P2-201ENST00000601934 717 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC093424.1-201ENST00000604999 338 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC087683.2-201ENST00000611384 326 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC005618.4-201ENST00000625053 554 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AC099786.3-201ENST00000565735 1410 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 CIR1P2-201ENST00000514821 1342 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 AL355578.1-201ENST00000607405 1328 ntBASIC5.74□□□□□ -1.49
RNF220Q5VTB9 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF220Q5VTB9 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms