Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 RN7SKP114-201ENST00000410327 279 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 RN7SL860P-201ENST00000473738 223 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 MRPS33P2-201ENST00000507850 322 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AL671862.1-201ENST00000515851 349 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 SNORA70.11-201ENST00000515987 138 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 SNORA70.13-201ENST00000516116 138 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AC012400.1-201ENST00000518452 381 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AC008033.2-201ENST00000542626 177 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AC084824.2-201ENST00000548906 345 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AC137768.1-201ENST00000549998 553 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 NPM1P5-201ENST00000557228 838 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AC016252.1-201ENST00000609721 474 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 AP005131.7-201ENST00000610087 611 ntBASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SHROOM1Q2M3G4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 RNA5SP428-201ENST00000365129 132 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AC008072.1-201ENST00000434254 824 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AC006466.1-201ENST00000438721 289 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AC007686.1-201ENST00000488511 463 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 OR4A17P-201ENST00000526032 904 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 GCSHP4-201ENST00000538792 439 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 ELOCP28-201ENST00000590044 317 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AC011626.1-201ENST00000604710 562 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AL137246.1-201ENST00000607072 977 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AL139124.1-201ENST00000609123 421 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 MIR6798-201ENST00000612887 67 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AC091905.4-201ENST00000623432 202 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AC132825.1-201ENST00000463573 2247 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 MTCO1P15-201ENST00000529569 1526 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AP000473.2-201ENST00000602659 1537 ntBASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.08□□□□□ -1.44
SHROOM1Q2M3G4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 RN7SKP185-201ENST00000362813 326 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 RNVU1-6-201ENST00000364688 164 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 PEX12P1-201ENST00000400284 1048 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 SMC4P1-201ENST00000414479 527 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 AL133482.1-201ENST00000415988 498 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 CHEK2P3-201ENST00000416118 248 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 AC013268.2-201ENST00000420753 337 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 RPS29P10-201ENST00000439197 166 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 AC092324.1-201ENST00000468671 324 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 AC020779.1-201ENST00000478757 796 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 RPL7P41-201ENST00000485823 957 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 AC021006.3-201ENST00000530771 192 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 AC105254.2-201ENST00000603636 436 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 AL031320.1-201ENST00000604177 357 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 OR8G7P-201ENST00000616658 848 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms