Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC005034.5-201ENST00000604219 466 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 AC022509.4-201ENST00000621404 572 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 AC004009.2-201ENST00000623016 728 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 AC241584.2-201ENST00000637142 2090 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SOX4Q06945 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX4Q06945 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX4Q06945 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC017007.4-201ENST00000503353 1352 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX4Q06945 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
SOX4Q06945 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX4Q06945 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SOX4Q06945 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 BRD7P1-201ENST00000557705 1915 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 RNU6-500P-201ENST00000362349 107 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 RNU6-353P-201ENST00000364266 108 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 RNA5SP431-201ENST00000410312 120 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 AC017035.1-201ENST00000411999 1115 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 AL713922.1-201ENST00000416477 747 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 BTF3P9-201ENST00000418784 283 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX4Q06945 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX4Q06945 AC004448.2-201ENST00000422360 586 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 CYCSP46-201ENST00000423569 204 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX4Q06945 ARAFP2-201ENST00000440565 559 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 AC004865.1-201ENST00000442276 1003 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 POU5F1P5-201ENST00000445059 658 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 RPL36AP33-201ENST00000450395 310 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX4Q06945 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.94□□□□□ -1.3
SOX4Q06945 AC147055.4-201ENST00000504399 745 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX4Q06945 AC091874.2-201ENST00000505889 720 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 AC098799.2-201ENST00000509466 868 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.94□□□□□ -1.3
SOX4Q06945 AP001207.1-201ENST00000524051 481 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 CYCSP25-201ENST00000525280 316 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SOX4Q06945 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX4Q06945 AC023968.1-201ENST00000560719 475 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 MTCO1P40-201ENST00000574371 625 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 AC134669.1-201ENST00000581275 672 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.94□□□□□ -1.3
SOX4Q06945 AL589863.1-201ENST00000595383 631 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 EIF1P6-201ENST00000600054 334 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 AC092354.1-201ENST00000606057 376 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.94□□□□□ -1.3
SOX4Q06945 AC135068.5-201ENST00000624197 983 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX4Q06945 AC132825.1-201ENST00000463573 2247 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 PSG10P-201ENST00000501199 1500 ntBASIC6.94□□□□□ -1.3
SOX4Q06945 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX4Q06945 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SOX4Q06945 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX4Q06945 OR2AH1P-202ENST00000641232 2744 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX4Q06945 TMCC1P1-201ENST00000518897 1980 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SOX4Q06945 AL133243.4-201ENST00000623116 3109 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SOX4Q06945 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SOX4Q06945 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
SOX4Q06945 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms