Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
LTBQ06643 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LTBQ06643 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LTBQ06643 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LTBQ06643 NEPNP-201ENST00000404786 1371 ntBASIC5.19□□□□□ -1.58
LTBQ06643 PDZK1P1-202ENST00000425209 1350 ntBASIC5.19□□□□□ -1.58
LTBQ06643 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LTBQ06643 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.19□□□□□ -1.58
LTBQ06643 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LTBQ06643 RNU6-1257P-201ENST00000384625 110 ntBASIC5.19□□□□□ -1.58
LTBQ06643 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AMZ2P2-201ENST00000406819 1057 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AL158827.1-201ENST00000416300 391 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AC009506.2-201ENST00000420635 840 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AL354766.1-201ENST00000423396 542 ntBASIC5.19□□□□□ -1.58
LTBQ06643 MRPS21P2-201ENST00000424704 264 ntBASIC5.19□□□□□ -1.58
LTBQ06643 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LTBQ06643 CETN4P-201ENST00000432407 469 ntBASIC5.19□□□□□ -1.58
LTBQ06643 ELOCP13-201ENST00000443934 329 ntBASIC5.19□□□□□ -1.58
LTBQ06643 OR7E116P-201ENST00000448529 957 ntBASIC5.19□□□□□ -1.58
LTBQ06643 RPS23P9-201ENST00000448848 438 ntBASIC5.19□□□□□ -1.58
LTBQ06643 OTX2P1-201ENST00000450956 354 ntBASIC5.19□□□□□ -1.58
LTBQ06643 SNRPCP3-201ENST00000474888 476 ntBASIC5.19□□□□□ -1.58
LTBQ06643 RPL23AP73-201ENST00000492507 471 ntBASIC5.19□□□□□ -1.58
LTBQ06643 DUTP1-201ENST00000493631 470 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 RN7SL466P-201ENST00000497546 295 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.19□□□□□ -1.58
LTBQ06643 GAPDHP71-201ENST00000511530 1003 ntBASIC5.19□□□□□ -1.58
LTBQ06643 RN7SKP5-201ENST00000517045 272 ntBASIC5.19□□□□□ -1.58
LTBQ06643 RNU6-334P-201ENST00000517072 102 ntBASIC5.19□□□□□ -1.58
LTBQ06643 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.19□□□□□ -1.58
LTBQ06643 CYCSP22-201ENST00000517555 339 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AC034205.1-201ENST00000520621 638 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 AC104115.2-201ENST00000523026 687 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AP001636.2-201ENST00000525517 696 ntBASIC5.19□□□□□ -1.58
LTBQ06643 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 OR10G5P-201ENST00000532733 358 ntBASIC5.19□□□□□ -1.58
LTBQ06643 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.19□□□□□ -1.58
LTBQ06643 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.19□□□□□ -1.58
LTBQ06643 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.19□□□□□ -1.58
LTBQ06643 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.19□□□□□ -1.58
LTBQ06643 AC098935.2-201ENST00000604222 466 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AC104695.2-201ENST00000605056 775 ntBASIC5.19□□□□□ -1.58
LTBQ06643 RPL12P48-201ENST00000605620 304 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AC084782.3-201ENST00000612282 578 ntBASIC5.19□□□□□ -1.58
LTBQ06643 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.19□□□□□ -1.58
LTBQ06643 Z99129.2-201ENST00000619967 314 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AL078595.3-201ENST00000623815 1166 ntBASIC5.19□□□□□ -1.58
LTBQ06643 AC120349.3-201ENST00000624377 529 ntBASIC5.19□□□□□ -1.58
LTBQ06643 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LTBQ06643 SAMMSON-227ENST00000642114 1199 ntBASIC5.19□□□□□ -1.58
LTBQ06643 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
LTBQ06643 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LTBQ06643 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LTBQ06643 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LTBQ06643 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LTBQ06643 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
LTBQ06643 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LTBQ06643 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LTBQ06643 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LTBQ06643 OR13C1P-202ENST00000641378 2919 ntBASIC5.18□□□□□ -1.58
LTBQ06643 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.18□□□□□ -1.58
LTBQ06643 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LTBQ06643 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
LTBQ06643 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LTBQ06643 SNORD51.1-201ENST00000365405 77 ntBASIC5.18□□□□□ -1.58
LTBQ06643 RNU6-650P-201ENST00000365658 111 ntBASIC5.18□□□□□ -1.58
LTBQ06643 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LTBQ06643 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LTBQ06643 RNU1-136P-201ENST00000384181 164 ntBASIC5.18□□□□□ -1.58
LTBQ06643 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.18□□□□□ -1.58
LTBQ06643 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.18□□□□□ -1.58
LTBQ06643 VN1R21P-201ENST00000426703 765 ntBASIC5.18□□□□□ -1.58
LTBQ06643 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.18□□□□□ -1.58
LTBQ06643 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.18□□□□□ -1.58
LTBQ06643 AC099670.2-201ENST00000435130 321 ntBASIC5.18□□□□□ -1.58
LTBQ06643 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.18□□□□□ -1.58
LTBQ06643 SUMO2P3-201ENST00000438311 288 ntBASIC5.18□□□□□ -1.58
LTBQ06643 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.18□□□□□ -1.58
LTBQ06643 AC091685.2-201ENST00000454924 864 ntBASIC5.18□□□□□ -1.58
LTBQ06643 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.18□□□□□ -1.58
LTBQ06643 DUXAP8-207ENST00000456786 622 ntBASIC5.18□□□□□ -1.58
LTBQ06643 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.18□□□□□ -1.58
LTBQ06643 RPS7P6-201ENST00000485777 579 ntBASIC5.18□□□□□ -1.58
LTBQ06643 BOLA3P3-201ENST00000505182 232 ntBASIC5.18□□□□□ -1.58
LTBQ06643 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.18□□□□□ -1.58
LTBQ06643 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.18□□□□□ -1.58
LTBQ06643 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.18□□□□□ -1.58
LTBQ06643 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.18□□□□□ -1.58
LTBQ06643 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.18□□□□□ -1.58
LTBQ06643 SOX5P1-201ENST00000524155 1127 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms