Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC092754.1-201ENST00000472975 479 ntBASIC4.46□□□□□ -1.7
LMO4P61968 CBX1P5-201ENST00000475330 559 ntBASIC4.46□□□□□ -1.7
LMO4P61968 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 RPS4XP20-201ENST00000505751 772 ntBASIC4.46□□□□□ -1.7
LMO4P61968 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.46□□□□□ -1.7
LMO4P61968 SCARNA1-201ENST00000517138 166 ntBASIC4.46□□□□□ -1.7
LMO4P61968 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 YWHABP2-201ENST00000540201 713 ntBASIC4.46□□□□□ -1.7
LMO4P61968 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.46□□□□□ -1.7
LMO4P61968 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.46□□□□□ -1.7
LMO4P61968 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.46□□□□□ -1.7
LMO4P61968 AC006116.3-201ENST00000592968 361 ntBASIC4.46□□□□□ -1.7
LMO4P61968 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.46□□□□□ -1.7
LMO4P61968 AC087763.1-201ENST00000603391 286 ntBASIC4.46□□□□□ -1.7
LMO4P61968 TAS2R6P-201ENST00000605022 826 ntBASIC4.46□□□□□ -1.7
LMO4P61968 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.46□□□□□ -1.7
LMO4P61968 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LMO4P61968 AC016957.2-201ENST00000616998 848 ntBASIC4.46□□□□□ -1.7
LMO4P61968 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.46□□□□□ -1.7
LMO4P61968 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.46□□□□□ -1.7
LMO4P61968 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.46□□□□□ -1.7
LMO4P61968 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LMO4P61968 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.46□□□□□ -1.7
LMO4P61968 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LMO4P61968 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.46□□□□□ -1.7
LMO4P61968 AL359955.1-201ENST00000455242 3275 ntBASIC4.46□□□□□ -1.7
LMO4P61968 CDC27P2-201ENST00000425026 1922 ntBASIC4.46□□□□□ -1.7
LMO4P61968 NCOA4P2-201ENST00000340589 1813 ntBASIC4.46□□□□□ -1.7
LMO4P61968 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LMO4P61968 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LMO4P61968 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.46□□□□□ -1.7
LMO4P61968 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
LMO4P61968 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LMO4P61968 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LMO4P61968 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LMO4P61968 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.45□□□□□ -1.7
LMO4P61968 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.45□□□□□ -1.7
LMO4P61968 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LMO4P61968 AL078621.3-201ENST00000623707 2042 ntBASIC4.45□□□□□ -1.7
LMO4P61968 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
LMO4P61968 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
LMO4P61968 MIR365B-201ENST00000362317 111 ntBASIC4.45□□□□□ -1.7
LMO4P61968 RNA5SP305-201ENST00000362665 119 ntBASIC4.45□□□□□ -1.7
LMO4P61968 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LMO4P61968 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LMO4P61968 U3.36-201ENST00000408418 213 ntBASIC4.45□□□□□ -1.7
LMO4P61968 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.45□□□□□ -1.7
LMO4P61968 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LMO4P61968 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.45□□□□□ -1.7
LMO4P61968 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.45□□□□□ -1.7
LMO4P61968 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 FCF1P6-201ENST00000456841 595 ntBASIC4.45□□□□□ -1.7
LMO4P61968 RPL31P53-201ENST00000457065 348 ntBASIC4.45□□□□□ -1.7
LMO4P61968 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.45□□□□□ -1.7
LMO4P61968 AC098583.1-201ENST00000480875 255 ntBASIC4.45□□□□□ -1.7
LMO4P61968 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 ATG10-AS1-201ENST00000504846 648 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.45□□□□□ -1.7
LMO4P61968 HMGN1P15-201ENST00000513870 295 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AP003049.1-201ENST00000529418 457 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.45□□□□□ -1.7
LMO4P61968 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.45□□□□□ -1.7
LMO4P61968 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.45□□□□□ -1.7
LMO4P61968 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.45□□□□□ -1.7
LMO4P61968 OR1AB1P-201ENST00000585564 761 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AP000769.2-201ENST00000602344 396 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AP001267.4-201ENST00000602598 545 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AC009237.13-201ENST00000603193 276 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AC027449.1-201ENST00000608890 407 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AC008833.1-201ENST00000611633 691 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AC009163.6-201ENST00000612367 342 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AC090510.2-201ENST00000617465 629 ntBASIC4.45□□□□□ -1.7
LMO4P61968 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 LINC01739-205ENST00000641890 573 ntBASIC4.45□□□□□ -1.7
LMO4P61968 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LMO4P61968 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LMO4P61968 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 AC104964.3-201ENST00000606115 2860 ntBASIC4.45□□□□□ -1.7
LMO4P61968 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 AC073429.2-201ENST00000569694 1444 ntBASIC4.45□□□□□ -1.7
LMO4P61968 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.45□□□□□ -1.7
LMO4P61968 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LMO4P61968 KYNUP3-201ENST00000574386 1341 ntBASIC4.45□□□□□ -1.7
LMO4P61968 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LMO4P61968 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LMO4P61968 AL353796.1-201ENST00000561542 3241 ntBASIC4.44□□□□□ -1.7
LMO4P61968 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LMO4P61968 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms