Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.58□□□□□ -1.68
ACTBP60709 AGGF1P3-201ENST00000493675 1213 ntBASIC4.58□□□□□ -1.68
ACTBP60709 NIFKP7-201ENST00000503365 834 ntBASIC4.58□□□□□ -1.68
ACTBP60709 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.58□□□□□ -1.68
ACTBP60709 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.58□□□□□ -1.68
ACTBP60709 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.58□□□□□ -1.68
ACTBP60709 AC079600.1-201ENST00000550326 297 ntBASIC4.58□□□□□ -1.68
ACTBP60709 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.58□□□□□ -1.68
ACTBP60709 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.58□□□□□ -1.68
ACTBP60709 RN7SL356P-201ENST00000582228 248 ntBASIC4.58□□□□□ -1.68
ACTBP60709 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.58□□□□□ -1.68
ACTBP60709 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACTBP60709 AP003400.3-201ENST00000624904 346 ntBASIC4.58□□□□□ -1.68
ACTBP60709 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.58□□□□□ -1.68
ACTBP60709 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.58□□□□□ -1.68
ACTBP60709 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
ACTBP60709 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ACTBP60709 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
ACTBP60709 SCN1A-220ENST00000641603 12506 ntBASIC4.58□□□□□ -1.68
ACTBP60709 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACTBP60709 Z95327.2-201ENST00000414579 1873 ntBASIC4.58□□□□□ -1.68
ACTBP60709 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
ACTBP60709 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACTBP60709 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ACTBP60709 AL022393.1-201ENST00000625142 1677 ntBASIC4.57□□□□□ -1.68
ACTBP60709 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACTBP60709 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACTBP60709 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.57□□□□□ -1.68
ACTBP60709 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACTBP60709 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACTBP60709 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 HSPA8P18-201ENST00000439846 1928 ntBASIC4.57□□□□□ -1.68
ACTBP60709 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACTBP60709 OR52B3P-201ENST00000314715 928 ntBASIC4.57□□□□□ -1.68
ACTBP60709 MIR375-201ENST00000362103 64 ntBASIC4.57□□□□□ -1.68
ACTBP60709 RN7SKP28-201ENST00000364770 305 ntBASIC4.57□□□□□ -1.68
ACTBP60709 RNU6-178P-201ENST00000384631 104 ntBASIC4.57□□□□□ -1.68
ACTBP60709 MIR551A-201ENST00000385042 96 ntBASIC4.57□□□□□ -1.68
ACTBP60709 DBIP1-201ENST00000401435 260 ntBASIC4.57□□□□□ -1.68
ACTBP60709 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACTBP60709 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.57□□□□□ -1.68
ACTBP60709 KCTD9P1-201ENST00000430462 1167 ntBASIC4.57□□□□□ -1.68
ACTBP60709 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 RPL34P6-201ENST00000432390 345 ntBASIC4.57□□□□□ -1.68
ACTBP60709 HMGB3P24-201ENST00000433260 622 ntBASIC4.57□□□□□ -1.68
ACTBP60709 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.57□□□□□ -1.68
ACTBP60709 MTND6P18-201ENST00000439477 513 ntBASIC4.57□□□□□ -1.68
ACTBP60709 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.57□□□□□ -1.68
ACTBP60709 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.57□□□□□ -1.68
ACTBP60709 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.57□□□□□ -1.68
ACTBP60709 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACTBP60709 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 AC011476.1-201ENST00000466725 307 ntBASIC4.57□□□□□ -1.68
ACTBP60709 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.57□□□□□ -1.68
ACTBP60709 NDUFA5P5-201ENST00000468361 342 ntBASIC4.57□□□□□ -1.68
ACTBP60709 AC094085.1-201ENST00000468914 584 ntBASIC4.57□□□□□ -1.68
ACTBP60709 RPSAP37-201ENST00000470913 821 ntBASIC4.57□□□□□ -1.68
ACTBP60709 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
ACTBP60709 AC087672.1-201ENST00000479876 766 ntBASIC4.57□□□□□ -1.68
ACTBP60709 AF186190.1-201ENST00000517470 480 ntBASIC4.57□□□□□ -1.68
ACTBP60709 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 AC107918.3-201ENST00000533272 382 ntBASIC4.57□□□□□ -1.68
ACTBP60709 OR8G3P-201ENST00000533406 921 ntBASIC4.57□□□□□ -1.68
ACTBP60709 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
ACTBP60709 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.57□□□□□ -1.68
ACTBP60709 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.57□□□□□ -1.68
ACTBP60709 AC005726.4-201ENST00000582858 458 ntBASIC4.57□□□□□ -1.68
ACTBP60709 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.57□□□□□ -1.68
ACTBP60709 AC037198.3-201ENST00000616754 526 ntBASIC4.57□□□□□ -1.68
ACTBP60709 AC131238.1-201ENST00000617135 328 ntBASIC4.57□□□□□ -1.68
ACTBP60709 AC015914.2-201ENST00000618167 288 ntBASIC4.57□□□□□ -1.68
ACTBP60709 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 AL390318.1-201ENST00000624564 687 ntBASIC4.57□□□□□ -1.68
ACTBP60709 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 AC087565.3-203ENST00000641018 837 ntBASIC4.57□□□□□ -1.68
ACTBP60709 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACTBP60709 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
ACTBP60709 SMG1P6-201ENST00000532337 2930 ntBASIC4.57□□□□□ -1.68
ACTBP60709 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ACTBP60709 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.57□□□□□ -1.68
ACTBP60709 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ACTBP60709 AC011447.7-201ENST00000624228 1590 ntBASIC4.57□□□□□ -1.68
ACTBP60709 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 AC106872.5-201ENST00000508856 1416 ntBASIC4.56□□□□□ -1.68
ACTBP60709 MTCO1P22-201ENST00000604619 1360 ntBASIC4.56□□□□□ -1.68
ACTBP60709 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 AC023421.1-201ENST00000590535 1785 ntBASIC4.56□□□□□ -1.68
ACTBP60709 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
ACTBP60709 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 RNA5SP223-201ENST00000365174 120 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms