Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.17□□□□□ -1.26
CLTCL1P53675 ECM1P2-201ENST00000503354 1577 ntBASIC7.17□□□□□ -1.26
CLTCL1P53675 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CLTCL1P53675 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLTCL1P53675 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLTCL1P53675 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLTCL1P53675 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CLTCL1P53675 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CLTCL1P53675 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 NPM1P36-201ENST00000415681 835 ntBASIC7.16□□□□□ -1.26
CLTCL1P53675 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.16□□□□□ -1.26
CLTCL1P53675 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC7.16□□□□□ -1.26
CLTCL1P53675 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.16□□□□□ -1.26
CLTCL1P53675 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.16□□□□□ -1.26
CLTCL1P53675 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.16□□□□□ -1.26
CLTCL1P53675 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC7.16□□□□□ -1.26
CLTCL1P53675 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.16□□□□□ -1.26
CLTCL1P53675 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.16□□□□□ -1.26
CLTCL1P53675 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.16□□□□□ -1.26
CLTCL1P53675 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
CLTCL1P53675 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CLTCL1P53675 AC099654.2-201ENST00000433031 1980 ntBASIC7.16□□□□□ -1.26
CLTCL1P53675 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLTCL1P53675 LRRC37BP1-201ENST00000398851 714 ntBASIC7.16□□□□□ -1.26
CLTCL1P53675 RPL7P58-201ENST00000402913 758 ntBASIC7.16□□□□□ -1.26
CLTCL1P53675 RNU2-50P-201ENST00000410494 143 ntBASIC7.16□□□□□ -1.26
CLTCL1P53675 AC009238.2-201ENST00000431026 355 ntBASIC7.16□□□□□ -1.26
CLTCL1P53675 SCAND3P1-201ENST00000439854 1060 ntBASIC7.16□□□□□ -1.26
CLTCL1P53675 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.16□□□□□ -1.26
CLTCL1P53675 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC7.16□□□□□ -1.26
CLTCL1P53675 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.16□□□□□ -1.26
CLTCL1P53675 SOX5P1-201ENST00000524155 1127 ntBASIC7.16□□□□□ -1.26
CLTCL1P53675 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CLTCL1P53675 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.16□□□□□ -1.26
CLTCL1P53675 AC008147.3-201ENST00000548666 354 ntBASIC7.16□□□□□ -1.26
CLTCL1P53675 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.16□□□□□ -1.26
CLTCL1P53675 AC104687.2-201ENST00000604442 342 ntBASIC7.16□□□□□ -1.26
CLTCL1P53675 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.16□□□□□ -1.26
CLTCL1P53675 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.15□□□□□ -1.26
CLTCL1P53675 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLTCL1P53675 AC093297.3-201ENST00000607056 2517 ntBASIC7.15□□□□□ -1.26
CLTCL1P53675 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.15□□□□□ -1.26
CLTCL1P53675 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLTCL1P53675 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CLTCL1P53675 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLTCL1P53675 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CLTCL1P53675 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CLTCL1P53675 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CLTCL1P53675 TBCAP2-201ENST00000416175 326 ntBASIC7.15□□□□□ -1.27
CLTCL1P53675 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC7.15□□□□□ -1.27
CLTCL1P53675 AL645608.4-201ENST00000423619 154 ntBASIC7.15□□□□□ -1.27
CLTCL1P53675 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.15□□□□□ -1.27
CLTCL1P53675 AL606490.8-201ENST00000441624 319 ntBASIC7.15□□□□□ -1.27
CLTCL1P53675 ATP6V0E1P2-201ENST00000441771 245 ntBASIC7.15□□□□□ -1.27
CLTCL1P53675 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC7.15□□□□□ -1.27
CLTCL1P53675 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.15□□□□□ -1.27
CLTCL1P53675 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.15□□□□□ -1.27
CLTCL1P53675 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC7.15□□□□□ -1.27
CLTCL1P53675 AC083809.1-201ENST00000615051 472 ntBASIC7.15□□□□□ -1.27
CLTCL1P53675 AC087821.1-201ENST00000623639 567 ntBASIC7.15□□□□□ -1.27
CLTCL1P53675 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.15□□□□□ -1.27
CLTCL1P53675 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.27
CLTCL1P53675 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CLTCL1P53675 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CLTCL1P53675 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CLTCL1P53675 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CLTCL1P53675 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.14□□□□□ -1.27
CLTCL1P53675 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CLTCL1P53675 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.14□□□□□ -1.27
CLTCL1P53675 RNA5SP241-201ENST00000391326 114 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 Z97832.1-201ENST00000402490 328 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 AL049697.2-201ENST00000403708 294 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 RPS21P8-201ENST00000413365 247 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 AC114755.2-201ENST00000413520 361 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 AL354868.1-201ENST00000417077 482 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 AC005154.2-201ENST00000438110 379 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.14□□□□□ -1.27
CLTCL1P53675 TPT1P12-201ENST00000448968 492 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 AC090058.1-201ENST00000498788 435 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 AC111000.6-201ENST00000514471 709 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 RNU2-30P-201ENST00000516209 141 ntBASIC7.14□□□□□ -1.27
CLTCL1P53675 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC7.14□□□□□ -1.27
CLTCL1P53675 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.14□□□□□ -1.27
CLTCL1P53675 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.14□□□□□ -1.27
CLTCL1P53675 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CLTCL1P53675 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CLTCL1P53675 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CLTCL1P53675 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CLTCL1P53675 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.14□□□□□ -1.27
CLTCL1P53675 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms