Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LIMK1P53667 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LIMK1P53667 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK1P53667 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.58□□□□□ -1.52
LIMK1P53667 MFSD8-219ENST00000641228 2559 ntBASIC5.58□□□□□ -1.52
LIMK1P53667 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.57□□□□□ -1.52
LIMK1P53667 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LIMK1P53667 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
LIMK1P53667 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LIMK1P53667 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.57□□□□□ -1.52
LIMK1P53667 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LIMK1P53667 AL136116.2-201ENST00000404020 785 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 MTND4LP13-201ENST00000425022 298 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.57□□□□□ -1.52
LIMK1P53667 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.57□□□□□ -1.52
LIMK1P53667 AC023141.8-201ENST00000442554 208 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.57□□□□□ -1.52
LIMK1P53667 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.57□□□□□ -1.52
LIMK1P53667 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.57□□□□□ -1.52
LIMK1P53667 AL157777.1-201ENST00000468100 304 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.57□□□□□ -1.52
LIMK1P53667 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.57□□□□□ -1.52
LIMK1P53667 AC117525.1-201ENST00000515228 503 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 FTH1P11-201ENST00000517577 551 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.57□□□□□ -1.52
LIMK1P53667 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.57□□□□□ -1.52
LIMK1P53667 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.57□□□□□ -1.52
LIMK1P53667 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.57□□□□□ -1.52
LIMK1P53667 OR7E10P-201ENST00000526420 991 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.57□□□□□ -1.52
LIMK1P53667 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.57□□□□□ -1.52
LIMK1P53667 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.57□□□□□ -1.52
LIMK1P53667 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.57□□□□□ -1.52
LIMK1P53667 AC027281.1-201ENST00000574178 758 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.57□□□□□ -1.52
LIMK1P53667 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.57□□□□□ -1.52
LIMK1P53667 AC005084.1-201ENST00000605160 304 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 OR51C1P-201ENST00000608504 942 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 AC008833.1-201ENST00000611633 691 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 uc_338.18-201ENST00000615451 175 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.57□□□□□ -1.52
LIMK1P53667 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.57□□□□□ -1.52
LIMK1P53667 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.57□□□□□ -1.52
LIMK1P53667 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.57□□□□□ -1.52
LIMK1P53667 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 PANDAR-201ENST00000629595 1506 ntBASIC5.57□□□□□ -1.52
LIMK1P53667 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.57□□□□□ -1.52
LIMK1P53667 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK1P53667 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LIMK1P53667 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 AL359955.1-201ENST00000455242 3275 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 TRIM60P17-201ENST00000415181 719 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 AL158827.1-201ENST00000416300 391 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 DSTNP5-201ENST00000427921 523 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.56□□□□□ -1.52
LIMK1P53667 AC091390.1-201ENST00000433904 331 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 AC114878.1-201ENST00000441166 358 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 RPL31P20-201ENST00000449593 360 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.56□□□□□ -1.52
LIMK1P53667 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK1P53667 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.56□□□□□ -1.52
LIMK1P53667 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 AC112187.1-201ENST00000455837 479 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 AC083982.1-201ENST00000485679 344 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 CCDC11P1-201ENST00000503137 1162 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LIMK1P53667 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK1P53667 AC139365.2-201ENST00000517972 253 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms