Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
NEK3P51956 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.07□□□□□ -1.44
NEK3P51956 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.07□□□□□ -1.44
NEK3P51956 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
NEK3P51956 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
NEK3P51956 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
NEK3P51956 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
NEK3P51956 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NEK3P51956 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 OR10R3P-201ENST00000361688 942 ntBASIC6.06□□□□□ -1.44
NEK3P51956 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NEK3P51956 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.06□□□□□ -1.44
NEK3P51956 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 RNU6-207P-201ENST00000384137 107 ntBASIC6.06□□□□□ -1.44
NEK3P51956 RNA5SP122-201ENST00000384457 108 ntBASIC6.06□□□□□ -1.44
NEK3P51956 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
NEK3P51956 RPL23AP59-201ENST00000399415 461 ntBASIC6.06□□□□□ -1.44
NEK3P51956 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.06□□□□□ -1.44
NEK3P51956 RPS24P8-201ENST00000431490 402 ntBASIC6.06□□□□□ -1.44
NEK3P51956 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.06□□□□□ -1.44
NEK3P51956 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.06□□□□□ -1.44
NEK3P51956 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.06□□□□□ -1.44
NEK3P51956 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.06□□□□□ -1.44
NEK3P51956 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.06□□□□□ -1.44
NEK3P51956 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.06□□□□□ -1.44
NEK3P51956 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.06□□□□□ -1.44
NEK3P51956 NPM1P39-201ENST00000449818 867 ntBASIC6.06□□□□□ -1.44
NEK3P51956 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.06□□□□□ -1.44
NEK3P51956 AC104115.2-201ENST00000523026 687 ntBASIC6.06□□□□□ -1.44
NEK3P51956 AC138701.1-201ENST00000524329 714 ntBASIC6.06□□□□□ -1.44
NEK3P51956 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.06□□□□□ -1.44
NEK3P51956 AC025260.1-201ENST00000548858 430 ntBASIC6.06□□□□□ -1.44
NEK3P51956 AC008507.2-201ENST00000588402 1176 ntBASIC6.06□□□□□ -1.44
NEK3P51956 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.06□□□□□ -1.44
NEK3P51956 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.06□□□□□ -1.44
NEK3P51956 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.06□□□□□ -1.44
NEK3P51956 AL391001.1-201ENST00000602747 715 ntBASIC6.06□□□□□ -1.44
NEK3P51956 AC100767.2-201ENST00000604840 693 ntBASIC6.06□□□□□ -1.44
NEK3P51956 AC090525.3-201ENST00000605601 189 ntBASIC6.06□□□□□ -1.44
NEK3P51956 AL136131.3-201ENST00000607600 188 ntBASIC6.06□□□□□ -1.44
NEK3P51956 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.06□□□□□ -1.44
NEK3P51956 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
NEK3P51956 AC006927.2-201ENST00000639256 389 ntBASIC6.06□□□□□ -1.44
NEK3P51956 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
NEK3P51956 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.06□□□□□ -1.44
NEK3P51956 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 AL591135.1-201ENST00000401578 5914 ntBASIC6.06□□□□□ -1.44
NEK3P51956 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.06□□□□□ -1.44
NEK3P51956 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NEK3P51956 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
NEK3P51956 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 SNRPEP6-201ENST00000407465 277 ntBASIC6.05□□□□□ -1.44
NEK3P51956 RN7SKP166-201ENST00000410812 305 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC013404.1-201ENST00000413068 249 ntBASIC6.05□□□□□ -1.44
NEK3P51956 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.05□□□□□ -1.44
NEK3P51956 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.05□□□□□ -1.44
NEK3P51956 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.05□□□□□ -1.44
NEK3P51956 BX284632.2-201ENST00000421091 399 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.05□□□□□ -1.44
NEK3P51956 FTH1P16-201ENST00000435241 552 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.05□□□□□ -1.44
NEK3P51956 NDUFS5P5-201ENST00000437256 321 ntBASIC6.05□□□□□ -1.44
NEK3P51956 VN1R110P-201ENST00000438988 971 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AL512605.1-202ENST00000441919 381 ntBASIC6.05□□□□□ -1.44
NEK3P51956 CUBNP2-201ENST00000443534 1139 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AL359955.2-201ENST00000445380 353 ntBASIC6.05□□□□□ -1.44
NEK3P51956 CASP3P1-201ENST00000446037 609 ntBASIC6.05□□□□□ -1.44
NEK3P51956 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.05□□□□□ -1.44
NEK3P51956 GEMIN2P1-201ENST00000454246 752 ntBASIC6.05□□□□□ -1.44
NEK3P51956 HMGB1P4-201ENST00000455362 567 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC110749.1-201ENST00000462007 357 ntBASIC6.05□□□□□ -1.44
NEK3P51956 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 AC023245.1-201ENST00000468501 517 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AL122020.1-201ENST00000472287 459 ntBASIC6.05□□□□□ -1.44
NEK3P51956 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.05□□□□□ -1.44
NEK3P51956 RPL23AP40-201ENST00000487630 390 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC093801.2-201ENST00000503966 1050 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.05□□□□□ -1.44
NEK3P51956 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.05□□□□□ -1.44
NEK3P51956 AC011411.1-201ENST00000509592 876 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC114781.3-201ENST00000512083 142 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.05□□□□□ -1.44
NEK3P51956 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.05□□□□□ -1.44
NEK3P51956 AP002812.4-201ENST00000532139 286 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.05□□□□□ -1.44
NEK3P51956 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.05□□□□□ -1.44
NEK3P51956 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.05□□□□□ -1.44
NEK3P51956 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.05□□□□□ -1.44
NEK3P51956 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms