Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CR1P49238 MIR6778-201ENST00000617912 73 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 MIR6839-201ENST00000620425 113 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 AC006840.1-201ENST00000623069 542 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 MIR1910-201ENST00000636955 80 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CX3CR1P49238 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CX3CR1P49238 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CR1P49238 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CR1P49238 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CR1P49238 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CR1P49238 AL606537.1-201ENST00000607258 2011 ntBASIC4.65□□□□□ -1.67
CX3CR1P49238 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.65□□□□□ -1.67
CX3CR1P49238 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CR1P49238 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CR1P49238 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CR1P49238 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.64□□□□□ -1.67
CX3CR1P49238 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CR1P49238 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CR1P49238 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CR1P49238 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.64□□□□□ -1.67
CX3CR1P49238 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CR1P49238 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.64□□□□□ -1.67
CX3CR1P49238 MIR133B-201ENST00000362210 119 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CR1P49238 RNA5SP487-201ENST00000410186 122 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 RPL12P9-201ENST00000412942 488 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 AL138787.1-202ENST00000437804 898 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 AL390119.1-201ENST00000440329 312 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.64□□□□□ -1.67
CX3CR1P49238 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CR1P49238 AC058823.1-201ENST00000485315 474 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 RPL15P21-201ENST00000495592 567 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.64□□□□□ -1.67
CX3CR1P49238 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AC027544.3-201ENST00000535082 757 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AC115989.2-201ENST00000578640 563 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 AC008521.2-201ENST00000591021 259 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AC005252.1-201ENST00000604518 1063 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 AC000068.2-201ENST00000608816 460 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 RN7SL787P-201ENST00000613000 284 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 AL691477.1-201ENST00000624398 162 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CX3CR1P49238 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CR1P49238 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.64□□□□□ -1.67
CX3CR1P49238 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.64□□□□□ -1.67
CX3CR1P49238 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CR1P49238 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CR1P49238 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC023421.1-201ENST00000590535 1785 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.63□□□□□ -1.67
CX3CR1P49238 TMSB4XP4-201ENST00000323496 618 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 RNA5SP234-201ENST00000363916 119 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.63□□□□□ -1.67
CX3CR1P49238 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 MIR105-1-201ENST00000385222 81 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 RN7SKP286-201ENST00000410894 299 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.63□□□□□ -1.67
CX3CR1P49238 GABARAPL3-201ENST00000412799 354 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.63□□□□□ -1.67
CX3CR1P49238 GTF3AP5-201ENST00000442645 697 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 RPL31P15-201ENST00000449770 338 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 RANP1-206ENST00000455094 651 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 MTCYBP14-201ENST00000457471 715 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC079168.1-201ENST00000458741 345 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.63□□□□□ -1.67
CX3CR1P49238 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC027369.5-201ENST00000533838 755 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 YWHABP2-201ENST00000540201 713 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms