Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPS6P15-201ENST00000431996 751 ntBASIC5.14□□□□□ -1.59
SOX2P48431 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 AC092473.1-201ENST00000441098 221 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC097499.1-201ENST00000444277 208 ntBASIC5.14□□□□□ -1.59
SOX2P48431 WDR82P2-201ENST00000444540 928 ntBASIC5.14□□□□□ -1.59
SOX2P48431 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 AC234771.2-201ENST00000445718 597 ntBASIC5.14□□□□□ -1.59
SOX2P48431 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.14□□□□□ -1.59
SOX2P48431 RPS18P1-201ENST00000447840 458 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC097359.1-201ENST00000447946 463 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC092685.1-201ENST00000447960 1243 ntBASIC5.14□□□□□ -1.59
SOX2P48431 CALM1P2-201ENST00000452941 448 ntBASIC5.14□□□□□ -1.59
SOX2P48431 RPL7P32-201ENST00000457119 744 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC019084.1-201ENST00000457337 432 ntBASIC5.14□□□□□ -1.59
SOX2P48431 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 AC004263.1-201ENST00000479327 332 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 RNA5SP303-201ENST00000516192 130 ntBASIC5.14□□□□□ -1.59
SOX2P48431 IGHV3-63-201ENST00000518422 341 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 AC027026.1-201ENST00000532323 742 ntBASIC5.14□□□□□ -1.59
SOX2P48431 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 NDUFA5P11-201ENST00000567995 343 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AP005136.2-201ENST00000583253 1049 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.14□□□□□ -1.59
SOX2P48431 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX2P48431 AC012368.3-201ENST00000604190 219 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC009948.4-201ENST00000604692 675 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC025588.2-201ENST00000604851 466 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC005377.1-201ENST00000605126 456 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 AP004607.9-201ENST00000618202 316 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC089999.3-201ENST00000622440 577 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AP002967.1-201ENST00000624203 539 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AC079416.3-201ENST00000624479 549 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SOX2P48431 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 PPBPP2-201ENST00000513150 1362 ntBASIC5.14□□□□□ -1.59
SOX2P48431 MTND4P8-201ENST00000514997 1362 ntBASIC5.14□□□□□ -1.59
SOX2P48431 AP001284.1-201ENST00000528393 2118 ntBASIC5.14□□□□□ -1.59
SOX2P48431 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SOX2P48431 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX2P48431 AL133268.1-201ENST00000405676 1401 ntBASIC5.14□□□□□ -1.59
SOX2P48431 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
SOX2P48431 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.13□□□□□ -1.59
SOX2P48431 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 AC011503.2-201ENST00000594230 1500 ntBASIC5.13□□□□□ -1.59
SOX2P48431 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.13□□□□□ -1.59
SOX2P48431 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 AC012321.1-201ENST00000561622 1588 ntBASIC5.13□□□□□ -1.59
SOX2P48431 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 AL360270.2-201ENST00000562952 5985 ntBASIC5.13□□□□□ -1.59
SOX2P48431 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SOX2P48431 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SOX2P48431 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SOX2P48431 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SOX2P48431 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX2P48431 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SOX2P48431 Y_RNA.578-201ENST00000390903 88 ntBASIC5.13□□□□□ -1.59
SOX2P48431 LRRC37BP1-201ENST00000398851 714 ntBASIC5.13□□□□□ -1.59
SOX2P48431 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 AC119751.3-201ENST00000399720 670 ntBASIC5.13□□□□□ -1.59
SOX2P48431 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX2P48431 RNU4-22P-201ENST00000411058 166 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX2P48431 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX2P48431 HIGD1AP4-201ENST00000430194 280 ntBASIC5.13□□□□□ -1.59
SOX2P48431 BX276092.6-201ENST00000430476 250 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC138761.5-201ENST00000433967 325 ntBASIC5.13□□□□□ -1.59
SOX2P48431 YWHAZP2-201ENST00000440317 728 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX2P48431 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX2P48431 AL590004.3-202ENST00000445883 451 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC004022.1-201ENST00000447766 1066 ntBASIC5.13□□□□□ -1.59
SOX2P48431 MRPL35P2-201ENST00000448009 511 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms