Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
BRCC3P46736 AP000473.2-201ENST00000602659 1537 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCC3P46736 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
BRCC3P46736 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.53□□□□□ -1.52
BRCC3P46736 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.53□□□□□ -1.52
BRCC3P46736 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.53□□□□□ -1.52
BRCC3P46736 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCC3P46736 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
BRCC3P46736 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCC3P46736 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
BRCC3P46736 OR9G4-201ENST00000302957 984 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 MIR589-201ENST00000385238 99 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCC3P46736 RN7SKP114-201ENST00000410327 279 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.53□□□□□ -1.52
BRCC3P46736 RBMY2KP-201ENST00000418221 992 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.53□□□□□ -1.52
BRCC3P46736 AL691447.1-201ENST00000419456 387 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.53□□□□□ -1.52
BRCC3P46736 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.53□□□□□ -1.52
BRCC3P46736 AC013410.1-201ENST00000436223 1232 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.53□□□□□ -1.52
BRCC3P46736 SUMO2P1-206ENST00000445436 284 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 TRY2P-201ENST00000448860 689 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 HIGD1AP8-201ENST00000453927 274 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.53□□□□□ -1.52
BRCC3P46736 RN7SL189P-201ENST00000468631 289 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCC3P46736 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCC3P46736 AC130364.2-201ENST00000528639 604 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 OR5D15P-201ENST00000531671 942 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 AC005000.1-201ENST00000536192 288 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.53□□□□□ -1.52
BRCC3P46736 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.53□□□□□ -1.52
BRCC3P46736 AL049539.1-201ENST00000611964 459 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 EIF3FP1-201ENST00000613970 806 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.53□□□□□ -1.52
BRCC3P46736 AL353662.3-201ENST00000625131 237 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCC3P46736 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCC3P46736 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.53□□□□□ -1.52
BRCC3P46736 AL121839.2-201ENST00000565058 6943 ntBASIC5.53□□□□□ -1.52
BRCC3P46736 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
BRCC3P46736 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCC3P46736 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
BRCC3P46736 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCC3P46736 NXF4-202ENST00000416098 1465 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 AC120036.2-201ENST00000509729 1474 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 AC005261.2-201ENST00000593427 4258 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.52□□□□□ -1.53
BRCC3P46736 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 AC004158.1-201ENST00000564508 4319 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.52□□□□□ -1.53
BRCC3P46736 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
BRCC3P46736 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
BRCC3P46736 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.52□□□□□ -1.53
BRCC3P46736 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.52□□□□□ -1.53
BRCC3P46736 Z80107.2-201ENST00000445127 392 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.52□□□□□ -1.53
BRCC3P46736 RN7SL197P-201ENST00000466981 299 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.52□□□□□ -1.53
BRCC3P46736 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 AC012123.2-201ENST00000485809 248 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.52□□□□□ -1.53
BRCC3P46736 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
BRCC3P46736 NPM1P21-201ENST00000513394 762 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.52□□□□□ -1.53
BRCC3P46736 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.52□□□□□ -1.53
BRCC3P46736 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.52□□□□□ -1.53
BRCC3P46736 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.52□□□□□ -1.53
BRCC3P46736 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 AC087783.2-201ENST00000605070 562 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 AC010632.3-201ENST00000611377 369 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 AL354950.1-201ENST00000614150 568 ntBASIC5.52□□□□□ -1.53
BRCC3P46736 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.52□□□□□ -1.53
BRCC3P46736 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
BRCC3P46736 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.52□□□□□ -1.53
BRCC3P46736 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.52□□□□□ -1.53
BRCC3P46736 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.52□□□□□ -1.53
BRCC3P46736 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRCC3P46736 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 INTS6P1-201ENST00000504674 2530 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
BRCC3P46736 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms