Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC068870.3-201ENST00000625077 2536 ntBASIC5.31□□□□□ -1.56
FDFT1P37268 AC245100.2-201ENST00000454544 1679 ntBASIC5.31□□□□□ -1.56
FDFT1P37268 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
FDFT1P37268 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.31□□□□□ -1.56
FDFT1P37268 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.31□□□□□ -1.56
FDFT1P37268 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FDFT1P37268 AC114947.2-201ENST00000565748 2125 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
FDFT1P37268 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FDFT1P37268 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FDFT1P37268 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.3□□□□□ -1.56
FDFT1P37268 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
FDFT1P37268 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FDFT1P37268 U3.3-201ENST00000362986 216 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.3□□□□□ -1.56
FDFT1P37268 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FDFT1P37268 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FDFT1P37268 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
FDFT1P37268 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FDFT1P37268 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
FDFT1P37268 AL390316.1-201ENST00000406279 553 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 RNA5SP178-201ENST00000410380 128 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 MTND4LP21-201ENST00000415303 295 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.3□□□□□ -1.56
FDFT1P37268 MARK2P12-201ENST00000420129 585 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.3□□□□□ -1.56
FDFT1P37268 CYCSP6-201ENST00000434498 302 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.3□□□□□ -1.56
FDFT1P37268 CYCSP12-201ENST00000437729 300 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 AL138899.2-201ENST00000439139 499 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 RPS29P10-201ENST00000439197 166 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 TPT1P1-201ENST00000458495 518 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.3□□□□□ -1.56
FDFT1P37268 RNU6-941P-201ENST00000516346 108 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.3□□□□□ -1.56
FDFT1P37268 AC126177.5-201ENST00000549599 178 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.3□□□□□ -1.56
FDFT1P37268 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.3□□□□□ -1.56
FDFT1P37268 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.3□□□□□ -1.56
FDFT1P37268 AP005131.7-201ENST00000610087 611 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 AC108359.1-201ENST00000616451 1211 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 AP000648.2-201ENST00000624182 404 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 AC135068.12-201ENST00000637370 931 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
FDFT1P37268 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.3□□□□□ -1.56
FDFT1P37268 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.3□□□□□ -1.56
FDFT1P37268 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
FDFT1P37268 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FDFT1P37268 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.3□□□□□ -1.56
FDFT1P37268 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
FDFT1P37268 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FDFT1P37268 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.29□□□□□ -1.56
FDFT1P37268 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.29□□□□□ -1.56
FDFT1P37268 AL513548.1-201ENST00000562904 1724 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FDFT1P37268 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
FDFT1P37268 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FDFT1P37268 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FDFT1P37268 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FDFT1P37268 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
FDFT1P37268 AC009804.1-201ENST00000400949 179 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 RNU2-22P-201ENST00000411266 212 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 AC093655.2-201ENST00000425735 631 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 AC097173.1-201ENST00000505862 819 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 AC090568.1-201ENST00000509499 856 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.29□□□□□ -1.56
FDFT1P37268 MIR3614-201ENST00000581261 86 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 AL589674.2-201ENST00000604304 337 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 AC015982.1-201ENST00000608113 465 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 Z95327.3-201ENST00000610385 572 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.29□□□□□ -1.56
FDFT1P37268 OR8A1-204ENST00000642111 1145 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.29□□□□□ -1.56
FDFT1P37268 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
FDFT1P37268 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
FDFT1P37268 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.29□□□□□ -1.56
FDFT1P37268 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
FDFT1P37268 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
FDFT1P37268 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
FDFT1P37268 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.29□□□□□ -1.56
FDFT1P37268 CASC19-221ENST00000641309 1382 ntBASIC5.29□□□□□ -1.56
FDFT1P37268 AC000374.1-201ENST00000434698 1745 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
FDFT1P37268 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.28□□□□□ -1.56
FDFT1P37268 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
FDFT1P37268 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FDFT1P37268 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FDFT1P37268 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
FDFT1P37268 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
FDFT1P37268 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
FDFT1P37268 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
FDFT1P37268 SNORA17A-201ENST00000391185 133 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 AL035079.1-201ENST00000405210 287 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.28□□□□□ -1.56
FDFT1P37268 SMC4P1-201ENST00000414479 527 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.28□□□□□ -1.56
FDFT1P37268 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.28□□□□□ -1.56
FDFT1P37268 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.28□□□□□ -1.56
FDFT1P37268 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms