Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.61□□□□□ -1.51
CHRNA3P32297 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNA3P32297 FKBP1AP1-201ENST00000594588 318 ntBASIC5.61□□□□□ -1.51
CHRNA3P32297 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNA3P32297 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNA3P32297 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CHRNA3P32297 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA3P32297 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CHRNA3P32297 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA3P32297 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA3P32297 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA3P32297 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA3P32297 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA3P32297 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA3P32297 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA3P32297 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA3P32297 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA3P32297 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA3P32297 BX510359.3-201ENST00000422168 306 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA3P32297 MTCYBP14-201ENST00000457471 715 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 AC245028.2-201ENST00000458673 253 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 AP000926.3-201ENST00000497201 299 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.6□□□□□ -1.51
CHRNA3P32297 SNORD116-30-201ENST00000516468 85 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 NPM1P52-201ENST00000518264 846 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 AC078878.1-201ENST00000539832 958 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 AC006349.1-201ENST00000555526 235 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 AL121839.1-201ENST00000556233 1185 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA3P32297 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA3P32297 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA3P32297 RN7SL356P-201ENST00000582228 248 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNA3P32297 SUMO2P15-201ENST00000604285 278 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNA3P32297 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA3P32297 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA3P32297 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA3P32297 SMG1P7-201ENST00000565246 2704 ntBASIC5.6□□□□□ -1.51
CHRNA3P32297 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNA3P32297 AC003985.2-201ENST00000562268 1669 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA3P32297 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CHRNA3P32297 AC112198.2-201ENST00000426589 6996 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CHRNA3P32297 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA3P32297 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA3P32297 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA3P32297 MAPK10-338ENST00000641647 3362 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA3P32297 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA3P32297 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA3P32297 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA3P32297 AL355433.1-201ENST00000422804 300 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA3P32297 FTLP19-201ENST00000433300 394 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 CYCSP12-201ENST00000437729 300 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 AL138787.1-202ENST00000437804 898 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 ARAFP2-201ENST00000440565 559 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA3P32297 RPL7P45-201ENST00000455851 743 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 AC011225.1-201ENST00000457751 369 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CHRNA3P32297 OR2AO1P-201ENST00000476497 403 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA3P32297 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CHRNA3P32297 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.59□□□□□ -1.51
CHRNA3P32297 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA3P32297 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CHRNA3P32297 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA3P32297 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA3P32297 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA3P32297 AP002884.5-201ENST00000595053 1132 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 IMMP1LP3-201ENST00000604197 224 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 AC009027.1-201ENST00000604510 479 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 AC067838.1-201ENST00000606064 577 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA3P32297 MIR6837-201ENST00000620884 64 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CHRNA3P32297 SAMMSON-209ENST00000641222 1100 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 CASC19-264ENST00000641912 1184 ntBASIC5.59□□□□□ -1.51
CHRNA3P32297 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA3P32297 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA3P32297 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.59□□□□□ -1.52
CHRNA3P32297 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHRNA3P32297 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.59□□□□□ -1.52
CHRNA3P32297 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.59□□□□□ -1.52
CHRNA3P32297 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CHRNA3P32297 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA3P32297 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHRNA3P32297 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CHRNA3P32297 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA3P32297 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA3P32297 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA3P32297 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CHRNA3P32297 AL031595.2-201ENST00000624215 19071 ntBASIC5.58□□□□□ -1.52
CHRNA3P32297 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA3P32297 RN7SKP153-201ENST00000365026 316 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms