Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
PCNAP12004 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCNAP12004 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCNAP12004 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.47□□□□□ -1.53
PCNAP12004 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PCNAP12004 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PCNAP12004 RNU1-150P-201ENST00000362491 162 ntBASIC5.47□□□□□ -1.53
PCNAP12004 RNU6-792P-201ENST00000363490 107 ntBASIC5.47□□□□□ -1.53
PCNAP12004 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCNAP12004 GSTA12P-201ENST00000402398 508 ntBASIC5.47□□□□□ -1.53
PCNAP12004 ATP5F1P6-201ENST00000402768 767 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AC245060.4-201ENST00000413293 1121 ntBASIC5.47□□□□□ -1.53
PCNAP12004 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.47□□□□□ -1.53
PCNAP12004 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.47□□□□□ -1.53
PCNAP12004 AL136231.1-201ENST00000429407 730 ntBASIC5.47□□□□□ -1.53
PCNAP12004 HMGB3P24-201ENST00000433260 622 ntBASIC5.47□□□□□ -1.53
PCNAP12004 Z84478.1-201ENST00000438230 1219 ntBASIC5.47□□□□□ -1.53
PCNAP12004 DNAJA1P5-201ENST00000440278 943 ntBASIC5.47□□□□□ -1.53
PCNAP12004 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.47□□□□□ -1.53
PCNAP12004 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.47□□□□□ -1.53
PCNAP12004 HMGN1P5-201ENST00000448591 263 ntBASIC5.47□□□□□ -1.53
PCNAP12004 RPL7AP10-201ENST00000481016 791 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AC009120.1-201ENST00000493458 473 ntBASIC5.47□□□□□ -1.53
PCNAP12004 MTCO2P9-201ENST00000503214 694 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.47□□□□□ -1.53
PCNAP12004 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.47□□□□□ -1.53
PCNAP12004 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.47□□□□□ -1.53
PCNAP12004 GAPDHP62-201ENST00000515313 990 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.47□□□□□ -1.53
PCNAP12004 AC004923.2-201ENST00000529649 369 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.47□□□□□ -1.53
PCNAP12004 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.47□□□□□ -1.53
PCNAP12004 AC137627.1-201ENST00000545761 289 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.47□□□□□ -1.53
PCNAP12004 AC107958.1-201ENST00000556576 290 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AC233266.2-201ENST00000567067 528 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.47□□□□□ -1.53
PCNAP12004 DHFRP1-201ENST00000579682 559 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.47□□□□□ -1.53
PCNAP12004 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.47□□□□□ -1.53
PCNAP12004 AC245389.2-201ENST00000616023 576 ntBASIC5.47□□□□□ -1.53
PCNAP12004 MIR1264-201ENST00000616374 69 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AL645927.2-201ENST00000618350 349 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AC242843.1-201ENST00000618702 573 ntBASIC5.47□□□□□ -1.53
PCNAP12004 AL390318.1-201ENST00000624564 687 ntBASIC5.47□□□□□ -1.53
PCNAP12004 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PCNAP12004 AC002525.1-201ENST00000624392 1622 ntBASIC5.47□□□□□ -1.53
PCNAP12004 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.47□□□□□ -1.53
PCNAP12004 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCNAP12004 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.47□□□□□ -1.53
PCNAP12004 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCNAP12004 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCNAP12004 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCNAP12004 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
PCNAP12004 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
PCNAP12004 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PCNAP12004 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PCNAP12004 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.46□□□□□ -1.53
PCNAP12004 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.46□□□□□ -1.53
PCNAP12004 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCNAP12004 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PCNAP12004 BTBD10P1-201ENST00000549824 1352 ntBASIC5.46□□□□□ -1.54
PCNAP12004 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.46□□□□□ -1.54
PCNAP12004 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCNAP12004 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCNAP12004 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCNAP12004 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
PCNAP12004 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCNAP12004 RNA5SP326-201ENST00000363209 110 ntBASIC5.46□□□□□ -1.54
PCNAP12004 RMRPP5-201ENST00000411156 267 ntBASIC5.46□□□□□ -1.54
PCNAP12004 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.46□□□□□ -1.54
PCNAP12004 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.46□□□□□ -1.54
PCNAP12004 PTP4A1P3-201ENST00000433661 420 ntBASIC5.46□□□□□ -1.54
PCNAP12004 NPM1P18-201ENST00000434232 732 ntBASIC5.46□□□□□ -1.54
PCNAP12004 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.46□□□□□ -1.54
PCNAP12004 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.46□□□□□ -1.54
PCNAP12004 AC023271.1-201ENST00000445936 1090 ntBASIC5.46□□□□□ -1.54
PCNAP12004 AP006222.1-205ENST00000450734 457 ntBASIC5.46□□□□□ -1.54
PCNAP12004 ABCC13-202ENST00000463099 3842 ntBASIC5.46□□□□□ -1.54
PCNAP12004 RN7SL197P-201ENST00000466981 299 ntBASIC5.46□□□□□ -1.54
PCNAP12004 RPSAP37-201ENST00000470913 821 ntBASIC5.46□□□□□ -1.54
PCNAP12004 AC022215.1-201ENST00000481770 362 ntBASIC5.46□□□□□ -1.54
PCNAP12004 AC093890.1-201ENST00000502554 540 ntBASIC5.46□□□□□ -1.54
PCNAP12004 NENFP3-201ENST00000503735 313 ntBASIC5.46□□□□□ -1.54
PCNAP12004 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCNAP12004 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.46□□□□□ -1.54
PCNAP12004 SNORA70.20-201ENST00000516848 126 ntBASIC5.46□□□□□ -1.54
PCNAP12004 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.46□□□□□ -1.54
PCNAP12004 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.46□□□□□ -1.54
PCNAP12004 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.46□□□□□ -1.54
PCNAP12004 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.46□□□□□ -1.54
PCNAP12004 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.46□□□□□ -1.54
PCNAP12004 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.46□□□□□ -1.54
PCNAP12004 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.46□□□□□ -1.54
PCNAP12004 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.46□□□□□ -1.54
PCNAP12004 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCNAP12004 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.46□□□□□ -1.54
PCNAP12004 AC104072.1-201ENST00000568817 668 ntBASIC5.46□□□□□ -1.54
PCNAP12004 AC015802.2-201ENST00000589690 189 ntBASIC5.46□□□□□ -1.54
PCNAP12004 AP002884.5-201ENST00000595053 1132 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms