Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RB1P06400 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RB1P06400 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
RB1P06400 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RB1P06400 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RB1P06400 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RB1P06400 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.83□□□□□ -1.48
RB1P06400 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RB1P06400 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RB1P06400 U3.23-201ENST00000391132 200 ntBASIC5.83□□□□□ -1.48
RB1P06400 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.83□□□□□ -1.48
RB1P06400 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.83□□□□□ -1.48
RB1P06400 AL807761.1-201ENST00000417622 171 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC234781.4-201ENST00000419384 244 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.83□□□□□ -1.48
RB1P06400 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.83□□□□□ -1.48
RB1P06400 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.83□□□□□ -1.48
RB1P06400 RPL12P17-201ENST00000432393 498 ntBASIC5.83□□□□□ -1.48
RB1P06400 AL365220.1-201ENST00000432923 399 ntBASIC5.83□□□□□ -1.48
RB1P06400 GSTM5P1-201ENST00000434751 660 ntBASIC5.83□□□□□ -1.48
RB1P06400 GAPDHP25-201ENST00000447061 1001 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC009963.4-201ENST00000448535 339 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.83□□□□□ -1.48
RB1P06400 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.83□□□□□ -1.48
RB1P06400 AC083982.1-201ENST00000485679 344 ntBASIC5.83□□□□□ -1.48
RB1P06400 TOMM22P4-201ENST00000511318 336 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC110775.1-201ENST00000513721 462 ntBASIC5.83□□□□□ -1.48
RB1P06400 RNU6-760P-201ENST00000516078 97 ntBASIC5.83□□□□□ -1.48
RB1P06400 RN7SKP147-201ENST00000517154 244 ntBASIC5.83□□□□□ -1.48
RB1P06400 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.83□□□□□ -1.48
RB1P06400 AC024940.3-201ENST00000538551 316 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC008126.1-201ENST00000549019 480 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC074029.2-201ENST00000551045 634 ntBASIC5.83□□□□□ -1.48
RB1P06400 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.83□□□□□ -1.48
RB1P06400 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.83□□□□□ -1.48
RB1P06400 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RB1P06400 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.83□□□□□ -1.48
RB1P06400 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.83□□□□□ -1.48
RB1P06400 AL592494.3-201ENST00000609485 464 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC105105.5-201ENST00000622635 1294 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC091953.3-201ENST00000623220 236 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC099494.2-201ENST00000623371 978 ntBASIC5.83□□□□□ -1.48
RB1P06400 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.83□□□□□ -1.48
RB1P06400 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.83□□□□□ -1.48
RB1P06400 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RB1P06400 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.83□□□□□ -1.48
RB1P06400 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.83□□□□□ -1.48
RB1P06400 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.83□□□□□ -1.48
RB1P06400 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RB1P06400 CDC27P2-201ENST00000425026 1922 ntBASIC5.83□□□□□ -1.48
RB1P06400 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.83□□□□□ -1.48
RB1P06400 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.83□□□□□ -1.48
RB1P06400 PANDAR-201ENST00000629595 1506 ntBASIC5.83□□□□□ -1.48
RB1P06400 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.82□□□□□ -1.48
RB1P06400 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.82□□□□□ -1.48
RB1P06400 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 AC245100.2-201ENST00000454544 1679 ntBASIC5.82□□□□□ -1.48
RB1P06400 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
RB1P06400 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.82□□□□□ -1.48
RB1P06400 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.82□□□□□ -1.48
RB1P06400 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 OR13C3-201ENST00000374781 1108 ntBASIC5.82□□□□□ -1.48
RB1P06400 SNORA16A-201ENST00000384342 137 ntBASIC5.82□□□□□ -1.48
RB1P06400 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 AMZ2P2-201ENST00000406819 1057 ntBASIC5.82□□□□□ -1.48
RB1P06400 RNGTTP1-201ENST00000420965 728 ntBASIC5.82□□□□□ -1.48
RB1P06400 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.82□□□□□ -1.48
RB1P06400 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.82□□□□□ -1.48
RB1P06400 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 NANOGP9-201ENST00000439890 892 ntBASIC5.82□□□□□ -1.48
RB1P06400 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 MTND6P32-201ENST00000457611 483 ntBASIC5.82□□□□□ -1.48
RB1P06400 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.82□□□□□ -1.48
RB1P06400 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.82□□□□□ -1.48
RB1P06400 OR5AZ1P-201ENST00000527448 943 ntBASIC5.82□□□□□ -1.48
RB1P06400 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.82□□□□□ -1.48
RB1P06400 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.82□□□□□ -1.48
RB1P06400 NMNAT1P5-201ENST00000559657 841 ntBASIC5.82□□□□□ -1.48
RB1P06400 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.82□□□□□ -1.48
RB1P06400 AL731537.2-201ENST00000561565 951 ntBASIC5.82□□□□□ -1.48
RB1P06400 AC005341.1-201ENST00000571086 708 ntBASIC5.82□□□□□ -1.48
RB1P06400 DHFRP1-201ENST00000579682 559 ntBASIC5.82□□□□□ -1.48
RB1P06400 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 AC007620.3-201ENST00000608131 497 ntBASIC5.82□□□□□ -1.48
RB1P06400 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.82□□□□□ -1.48
RB1P06400 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 AL162574.2-201ENST00000614618 657 ntBASIC5.82□□□□□ -1.48
RB1P06400 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 AL162233.1-201ENST00000620014 944 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms