Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNU2-18P-201ENST00000411224 162 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 CDY17P-201ENST00000414121 1282 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 NENFP1-201ENST00000419476 466 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AL358176.3-201ENST00000420757 454 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 SETP10-201ENST00000424368 814 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 CDY8P-201ENST00000428380 1279 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 RPL12P17-201ENST00000432393 498 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 CDY20P-201ENST00000447528 1279 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 RPL32P33-201ENST00000487023 394 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 RFPL4AP3-201ENST00000515267 345 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AL671862.1-201ENST00000515851 349 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 SCARNA18.1-201ENST00000516330 83 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC021678.3-201ENST00000517893 476 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC006512.2-201ENST00000543250 486 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC090236.2-201ENST00000587933 1101 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AP000769.2-201ENST00000602344 396 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AP001437.1-201ENST00000608783 456 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AC006210.2-201ENST00000367074 1545 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 QRSL1P1-201ENST00000400977 1540 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 IFIT1P1-201ENST00000400497 1449 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 SLC9B1P1-201ENST00000331172 1337 ntBASIC3.94□□□□□ -1.78
HLA-DQA1P01909 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HLA-DQA1P01909 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 IL6STP1-201ENST00000346911 1020 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AL159987.1-201ENST00000347911 293 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 MIR589-201ENST00000385238 99 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 RPL12P43-201ENST00000420608 499 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 PLA2G12AP2-201ENST00000424744 264 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 NAP1L4P2-201ENST00000425958 899 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC115283.1-201ENST00000427353 400 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 CFL1P4-201ENST00000451536 498 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC093166.2-201ENST00000455969 1017 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC108751.2-201ENST00000469993 231 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 RPL37P23-201ENST00000492641 294 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 RBBP4P1-201ENST00000502424 1276 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 CCNHP1-201ENST00000513311 678 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 RNA5SP340-201ENST00000517132 107 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 RPL23AP53-201ENST00000521854 457 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 HNRNPRP2-201ENST00000528421 743 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 EIF4A2P5-201ENST00000529914 499 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC079905.1-201ENST00000549280 475 ntBASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DQA1P01909 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms