Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFP01375 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TNFP01375 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFP01375 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFP01375 AC140134.1-201ENST00000511830 3544 ntBASIC5.03□□□□□ -1.6
TNFP01375 AC112198.2-201ENST00000426589 6996 ntBASIC5.03□□□□□ -1.6
TNFP01375 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.03□□□□□ -1.6
TNFP01375 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TNFP01375 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
TNFP01375 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFP01375 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TNFP01375 AL353625.1-202ENST00000366273 571 ntBASIC5.03□□□□□ -1.6
TNFP01375 AL035419.1-201ENST00000397037 564 ntBASIC5.03□□□□□ -1.6
TNFP01375 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 AC009784.1-201ENST00000426484 460 ntBASIC5.03□□□□□ -1.6
TNFP01375 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFP01375 RPL31P44-201ENST00000447680 377 ntBASIC5.03□□□□□ -1.6
TNFP01375 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFP01375 AC020779.1-201ENST00000478757 796 ntBASIC5.03□□□□□ -1.6
TNFP01375 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFP01375 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFP01375 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.03□□□□□ -1.6
TNFP01375 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFP01375 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFP01375 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFP01375 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFP01375 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFP01375 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.03□□□□□ -1.6
TNFP01375 MIR4700-201ENST00000578311 74 ntBASIC5.03□□□□□ -1.6
TNFP01375 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFP01375 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFP01375 MIR4691-201ENST00000583764 85 ntBASIC5.03□□□□□ -1.6
TNFP01375 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFP01375 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFP01375 AC010632.3-201ENST00000611377 369 ntBASIC5.03□□□□□ -1.6
TNFP01375 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFP01375 AL356752.1-201ENST00000615844 593 ntBASIC5.03□□□□□ -1.6
TNFP01375 AC100827.5-201ENST00000615883 426 ntBASIC5.03□□□□□ -1.6
TNFP01375 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.03□□□□□ -1.6
TNFP01375 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.03□□□□□ -1.6
TNFP01375 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
TNFP01375 AC092070.2-203ENST00000598377 3644 ntBASIC5.03□□□□□ -1.6
TNFP01375 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 AL031595.2-201ENST00000624215 19071 ntBASIC5.03□□□□□ -1.6
TNFP01375 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFP01375 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFP01375 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFP01375 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.03□□□□□ -1.6
TNFP01375 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNFP01375 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC5.02□□□□□ -1.61
TNFP01375 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNFP01375 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNFP01375 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNFP01375 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNFP01375 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TNFP01375 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TNFP01375 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNFP01375 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.02□□□□□ -1.61
TNFP01375 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNFP01375 RNA5SP453-201ENST00000362503 119 ntBASIC5.02□□□□□ -1.61
TNFP01375 RN7SKP104-201ENST00000362605 328 ntBASIC5.02□□□□□ -1.61
TNFP01375 RNA5SP428-201ENST00000365129 132 ntBASIC5.02□□□□□ -1.61
TNFP01375 OR1L6-202ENST00000373684 1044 ntBASIC5.02□□□□□ -1.61
TNFP01375 SNORA48.4-201ENST00000391089 134 ntBASIC5.02□□□□□ -1.61
TNFP01375 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.02□□□□□ -1.61
TNFP01375 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.02□□□□□ -1.61
TNFP01375 AC104837.2-201ENST00000427236 424 ntBASIC5.02□□□□□ -1.61
TNFP01375 AC091685.2-201ENST00000454924 864 ntBASIC5.02□□□□□ -1.61
TNFP01375 AC108161.1-201ENST00000461060 402 ntBASIC5.02□□□□□ -1.61
TNFP01375 RPS3AP41-201ENST00000462701 778 ntBASIC5.02□□□□□ -1.61
TNFP01375 RN7SL814P-201ENST00000487715 300 ntBASIC5.02□□□□□ -1.61
TNFP01375 COX6B1P2-201ENST00000489624 230 ntBASIC5.02□□□□□ -1.61
TNFP01375 AC140172.1-201ENST00000502928 141 ntBASIC5.02□□□□□ -1.61
TNFP01375 AC097173.1-201ENST00000505862 819 ntBASIC5.02□□□□□ -1.61
TNFP01375 SEPT10P1-201ENST00000517342 1162 ntBASIC5.02□□□□□ -1.61
TNFP01375 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.02□□□□□ -1.61
TNFP01375 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.02□□□□□ -1.61
TNFP01375 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.02□□□□□ -1.61
TNFP01375 BNIP3P35-201ENST00000604530 490 ntBASIC5.02□□□□□ -1.61
TNFP01375 AL627230.1-201ENST00000613077 211 ntBASIC5.02□□□□□ -1.61
TNFP01375 AC073575.2-201ENST00000614212 627 ntBASIC5.02□□□□□ -1.61
TNFP01375 AL591926.8-201ENST00000616876 211 ntBASIC5.02□□□□□ -1.61
TNFP01375 AC112694.2-201ENST00000623697 768 ntBASIC5.02□□□□□ -1.61
TNFP01375 AP000550.3-201ENST00000637734 379 ntBASIC5.02□□□□□ -1.61
TNFP01375 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TNFP01375 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.02□□□□□ -1.61
TNFP01375 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNFP01375 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNFP01375 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.02□□□□□ -1.61
TNFP01375 CASC19-221ENST00000641309 1382 ntBASIC5.02□□□□□ -1.61
TNFP01375 AC006210.2-201ENST00000367074 1545 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms