Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MIR105-1-201ENST00000385222 81 ntBASIC6.39□□□□□ -1.39
MBD4O95243 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
MBD4O95243 SNORD65-201ENST00000391079 73 ntBASIC6.39□□□□□ -1.39
MBD4O95243 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
MBD4O95243 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.39□□□□□ -1.39
MBD4O95243 FAM204CP-201ENST00000424489 642 ntBASIC6.39□□□□□ -1.39
MBD4O95243 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.39□□□□□ -1.39
MBD4O95243 AC138761.5-201ENST00000433967 325 ntBASIC6.39□□□□□ -1.39
MBD4O95243 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.39□□□□□ -1.39
MBD4O95243 AL359265.1-201ENST00000440296 795 ntBASIC6.39□□□□□ -1.39
MBD4O95243 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.39□□□□□ -1.39
MBD4O95243 AC104629.2-201ENST00000468627 598 ntBASIC6.39□□□□□ -1.39
MBD4O95243 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.39□□□□□ -1.39
MBD4O95243 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.39□□□□□ -1.39
MBD4O95243 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.39□□□□□ -1.39
MBD4O95243 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.39□□□□□ -1.39
MBD4O95243 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.39□□□□□ -1.39
MBD4O95243 AC009027.1-201ENST00000604510 479 ntBASIC6.39□□□□□ -1.39
MBD4O95243 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.39□□□□□ -1.39
MBD4O95243 AC016769.4-201ENST00000616893 535 ntBASIC6.39□□□□□ -1.39
MBD4O95243 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MBD4O95243 AL118508.4-201ENST00000624142 1176 ntBASIC6.39□□□□□ -1.39
MBD4O95243 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.39□□□□□ -1.39
MBD4O95243 AC099654.6-201ENST00000636487 512 ntBASIC6.39□□□□□ -1.39
MBD4O95243 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
MBD4O95243 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
MBD4O95243 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MBD4O95243 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MBD4O95243 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.39□□□□□ -1.39
MBD4O95243 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MBD4O95243 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MBD4O95243 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
MBD4O95243 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.38□□□□□ -1.39
MBD4O95243 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.38□□□□□ -1.39
MBD4O95243 AP005435.3-201ENST00000531260 3198 ntBASIC6.38□□□□□ -1.39
MBD4O95243 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MBD4O95243 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
MBD4O95243 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.38□□□□□ -1.39
MBD4O95243 MIR137-201ENST00000385223 102 ntBASIC6.38□□□□□ -1.39
MBD4O95243 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
MBD4O95243 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
MBD4O95243 HSPA8P15-201ENST00000401676 786 ntBASIC6.38□□□□□ -1.39
MBD4O95243 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
MBD4O95243 DUTP5-201ENST00000406790 469 ntBASIC6.38□□□□□ -1.39
MBD4O95243 AC093655.2-201ENST00000425735 631 ntBASIC6.38□□□□□ -1.39
MBD4O95243 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.38□□□□□ -1.39
MBD4O95243 EEF1B2P5-201ENST00000444820 548 ntBASIC6.38□□□□□ -1.39
MBD4O95243 MYO5BP2-201ENST00000449815 1277 ntBASIC6.38□□□□□ -1.39
MBD4O95243 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MBD4O95243 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.38□□□□□ -1.39
MBD4O95243 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.38□□□□□ -1.39
MBD4O95243 AC027308.1-201ENST00000517993 110 ntBASIC6.38□□□□□ -1.39
MBD4O95243 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.38□□□□□ -1.39
MBD4O95243 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.38□□□□□ -1.39
MBD4O95243 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.38□□□□□ -1.39
MBD4O95243 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.38□□□□□ -1.39
MBD4O95243 AC074029.2-201ENST00000551045 634 ntBASIC6.38□□□□□ -1.39
MBD4O95243 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
MBD4O95243 KATNBL1P1-201ENST00000605192 748 ntBASIC6.38□□□□□ -1.39
MBD4O95243 MIR6133-201ENST00000617057 108 ntBASIC6.38□□□□□ -1.39
MBD4O95243 AC090527.3-201ENST00000619041 548 ntBASIC6.38□□□□□ -1.39
MBD4O95243 AL133370.2-201ENST00000619934 439 ntBASIC6.38□□□□□ -1.39
MBD4O95243 uc_338.7-201ENST00000621834 124 ntBASIC6.38□□□□□ -1.39
MBD4O95243 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MBD4O95243 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.38□□□□□ -1.39
MBD4O95243 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.38□□□□□ -1.39
MBD4O95243 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.38□□□□□ -1.39
MBD4O95243 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.38□□□□□ -1.39
MBD4O95243 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MBD4O95243 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
MBD4O95243 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.37□□□□□ -1.39
MBD4O95243 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.37□□□□□ -1.39
MBD4O95243 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MBD4O95243 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MBD4O95243 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
MBD4O95243 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
MBD4O95243 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MBD4O95243 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MBD4O95243 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.37□□□□□ -1.39
MBD4O95243 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.37□□□□□ -1.39
MBD4O95243 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MBD4O95243 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MBD4O95243 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MBD4O95243 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MBD4O95243 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.37□□□□□ -1.39
MBD4O95243 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.37□□□□□ -1.39
MBD4O95243 AL589655.1-201ENST00000405398 482 ntBASIC6.37□□□□□ -1.39
MBD4O95243 AMZ2P2-201ENST00000406819 1057 ntBASIC6.37□□□□□ -1.39
MBD4O95243 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.37□□□□□ -1.39
MBD4O95243 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.37□□□□□ -1.39
MBD4O95243 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.37□□□□□ -1.39
MBD4O95243 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.37□□□□□ -1.39
MBD4O95243 RPS11P7-201ENST00000442125 465 ntBASIC6.37□□□□□ -1.39
MBD4O95243 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.37□□□□□ -1.39
MBD4O95243 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.37□□□□□ -1.39
MBD4O95243 AC026348.1-201ENST00000462549 1053 ntBASIC6.37□□□□□ -1.39
MBD4O95243 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.37□□□□□ -1.39
MBD4O95243 AC004815.1-201ENST00000484185 331 ntBASIC6.37□□□□□ -1.39
MBD4O95243 IGBP1P4-201ENST00000503202 879 ntBASIC6.37□□□□□ -1.39
MBD4O95243 AC093763.2-201ENST00000505334 1223 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 1122 ms