Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL133268.1-201ENST00000405676 1401 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 CASC19-206ENST00000641028 1430 ntBASIC4.09□□□□□ -1.75
SSSCA1O60232 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.09□□□□□ -1.75
SSSCA1O60232 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SSSCA1O60232 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSSCA1O60232 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSSCA1O60232 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.09□□□□□ -1.76
SSSCA1O60232 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SSSCA1O60232 OR52B3P-201ENST00000314715 928 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSSCA1O60232 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSSCA1O60232 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSSCA1O60232 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSSCA1O60232 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSSCA1O60232 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SSSCA1O60232 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SSSCA1O60232 AL592291.1-201ENST00000403830 352 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 RN7SKP199-201ENST00000410325 305 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 Z68694.1-201ENST00000413929 841 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.08□□□□□ -1.76
SSSCA1O60232 AC066692.1-201ENST00000421721 457 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 TNPO1P1-201ENST00000423641 1138 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.08□□□□□ -1.76
SSSCA1O60232 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 AC069154.1-201ENST00000432914 542 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AC073052.1-201ENST00000440417 714 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSSCA1O60232 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSSCA1O60232 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.08□□□□□ -1.76
SSSCA1O60232 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 AL691482.1-201ENST00000453255 87 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AL445433.1-201ENST00000457507 257 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 RN7SL443P-201ENST00000464331 290 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AC011476.1-201ENST00000466725 307 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.08□□□□□ -1.76
SSSCA1O60232 SIAH1P1-201ENST00000479411 923 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.08□□□□□ -1.76
SSSCA1O60232 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.08□□□□□ -1.76
SSSCA1O60232 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 CYCSP22-201ENST00000517555 339 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSSCA1O60232 AC107958.1-201ENST00000556576 290 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.08□□□□□ -1.76
SSSCA1O60232 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSSCA1O60232 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.08□□□□□ -1.76
SSSCA1O60232 SNORD91B-202ENST00000608459 222 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 AP005131.7-201ENST00000610087 611 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 MIR6806-201ENST00000622141 64 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 AL672167.1-203ENST00000641299 2975 ntBASIC4.08□□□□□ -1.76
SSSCA1O60232 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SSSCA1O60232 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSSCA1O60232 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.08□□□□□ -1.76
SSSCA1O60232 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.07□□□□□ -1.76
SSSCA1O60232 AC007342.5-201ENST00000571340 2142 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSSCA1O60232 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.07□□□□□ -1.76
SSSCA1O60232 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SSSCA1O60232 AC090181.3-201ENST00000624777 1514 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSSCA1O60232 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 DDX18P5-201ENST00000534547 1306 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSSCA1O60232 RNA5SP46-201ENST00000362370 120 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 RNA5SP319-201ENST00000362768 119 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 SNORA73.1-201ENST00000363107 205 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 RN7SKP113-201ENST00000363891 295 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 RN7SKP171-201ENST00000364417 303 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.07□□□□□ -1.76
SSSCA1O60232 RPL34P3-201ENST00000421454 338 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.07□□□□□ -1.76
SSSCA1O60232 DSTNP5-201ENST00000427921 523 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 NMNAT1P2-201ENST00000435192 860 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.07□□□□□ -1.76
SSSCA1O60232 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.07□□□□□ -1.76
SSSCA1O60232 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSSCA1O60232 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.07□□□□□ -1.76
SSSCA1O60232 AL445665.1-202ENST00000452436 324 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 AC011225.1-201ENST00000457751 369 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.07□□□□□ -1.76
SSSCA1O60232 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.07□□□□□ -1.76
SSSCA1O60232 AC006499.4-201ENST00000510947 694 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.07□□□□□ -1.76
SSSCA1O60232 RFPL4AP5-201ENST00000514977 504 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 AL671862.1-201ENST00000515851 349 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.07□□□□□ -1.76
SSSCA1O60232 OR10D4P-201ENST00000525892 951 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 CASP1P2-201ENST00000526830 1258 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 AL512310.9-201ENST00000553311 948 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.07□□□□□ -1.76
SSSCA1O60232 AC026826.3-201ENST00000561747 158 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms