Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RPL7P39-201ENST00000481157 744 ntBASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 AC108043.1-201ENST00000512696 574 ntBASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 CASC19-264ENST00000641912 1184 ntBASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 AC073136.1-201ENST00000449426 2884 ntBASIC6.36□□□□□ -1.39
CTNNA3Q9UI47 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 RNA5SP241-201ENST00000391326 114 ntBASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 AC093655.2-201ENST00000425735 631 ntBASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 RPL7L1P9-201ENST00000431298 745 ntBASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 MTND6P5-201ENST00000448266 512 ntBASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 AC090804.1-201ENST00000448870 490 ntBASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 CBX1P5-201ENST00000475330 559 ntBASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 EIF4A2P5-201ENST00000529914 499 ntBASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 AL390726.5-202ENST00000564800 256 ntBASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 FKBP1AP1-201ENST00000594588 318 ntBASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA3Q9UI47 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 THAP12P5-201ENST00000405864 2275 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 OR55B1P-203ENST00000641518 2602 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 RNA5SP183-201ENST00000362452 119 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 RN7SKP216-201ENST00000411050 312 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 NIPA2P1-201ENST00000426223 976 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 RPL19P16-201ENST00000433839 588 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 RPS26P41-201ENST00000450370 284 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AC093270.2-201ENST00000486157 792 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 RPS12P31-201ENST00000491419 398 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 CDH12P4-201ENST00000517835 295 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 CDH12P3-201ENST00000517935 295 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 CDH12P1-201ENST00000518435 295 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AL049779.2-201ENST00000553847 315 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 RPL10P14-201ENST00000565265 298 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AL162431.4-201ENST00000604674 411 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AC136428.4-201ENST00000634254 1155 ntBASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA3Q9UI47 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 OR9G4-201ENST00000302957 984 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 RNU6-171P-201ENST00000384354 107 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 MIR223-201ENST00000385204 110 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 RNU1-149P-201ENST00000390870 161 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 FTLP19-201ENST00000433300 394 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC090018.1-201ENST00000434369 367 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms