Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 AC087763.1-201ENST00000603391 286 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 RNA5SP439-201ENST00000617595 124 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 LINC01739-205ENST00000641890 573 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 PANDAR-201ENST00000629595 1506 ntBASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCF1Q9UBD9 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC112198.2-201ENST00000426589 6996 ntBASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 RNA5SP453-201ENST00000362503 119 ntBASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 U3.3-201ENST00000362986 216 ntBASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 NUDT19P3-201ENST00000404698 555 ntBASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AP002371.1-201ENST00000463604 433 ntBASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 RN7SL826P-201ENST00000479724 288 ntBASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC109462.1-201ENST00000491087 368 ntBASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 EIF3KP3-201ENST00000514461 639 ntBASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC011447.4-201ENST00000587562 111 ntBASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AP003400.2-201ENST00000624036 666 ntBASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLCF1Q9UBD9 AC003973.3-201ENST00000624863 2822 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 RNA5SP305-201ENST00000362665 119 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC211486.3-201ENST00000412694 621 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 EI24P4-201ENST00000423683 1078 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC124944.2-201ENST00000429866 1242 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC073850.1-201ENST00000449243 255 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC090114.3-201ENST00000479267 829 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 OR2A3P-201ENST00000493774 953 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 NDUFA5P12-201ENST00000503796 343 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC111000.6-201ENST00000514471 709 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC234775.3-201ENST00000564612 656 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 RN7SL708P-201ENST00000580952 299 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC025857.2-201ENST00000602711 238 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC108738.1-201ENST00000603703 237 ntBASIC4.69□□□□□ -1.66
CLCF1Q9UBD9 AC009597.2-201ENST00000604659 592 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms