Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 NXF4-202ENST00000416098 1465 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 MIR105-1-201ENST00000385222 81 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 VN1R54P-201ENST00000435210 1049 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 TRY2P-201ENST00000448860 689 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC104634.1-201ENST00000452720 462 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 RN7SL423P-201ENST00000486202 304 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 RN7SL447P-201ENST00000494711 245 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 MTND6P2-201ENST00000512226 524 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 HMGB1P40-201ENST00000525121 540 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 YWHABP2-201ENST00000540201 713 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC009597.2-201ENST00000604659 592 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 WBP1LP8-201ENST00000617401 327 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC091932.2-201ENST00000623014 291 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC009120.7-201ENST00000623452 780 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC074101.1-201ENST00000637861 241 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC004656.1-201ENST00000568479 4951 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 BCORP1-203ENST00000513194 5093 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AC018765.1-201ENST00000623357 3446 ntBASIC4.95□□□□□ -1.62
CCDC88CQ9P219 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC88CQ9P219 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AL591135.1-201ENST00000401578 5914 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 RPS3AP41-201ENST00000462701 778 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC016559.2-201ENST00000510759 359 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 RN7SL371P-201ENST00000578099 267 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 RN7SL290P-201ENST00000578661 300 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC125494.2-201ENST00000602431 657 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC073575.2-201ENST00000614212 627 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC090527.3-201ENST00000619041 548 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC087385.3-201ENST00000620477 187 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC112255.1-201ENST00000624070 2493 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 RPS26P13-201ENST00000419030 330 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 CYCSP24-201ENST00000445119 316 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 MYO5BP2-201ENST00000449815 1277 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 CR383656.1-201ENST00000484916 377 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC133644.2-201ENST00000608142 540 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 Mico1.1-201ENST00000611698 204 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 EIF3FP1-201ENST00000613970 806 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AL157762.1-201ENST00000619612 415 ntBASIC4.94□□□□□ -1.62
CCDC88CQ9P219 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
CCDC88CQ9P219 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms