Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 OR1L6-202ENST00000373684 1044 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 RPS29P10-201ENST00000439197 166 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC092647.3-201ENST00000443044 633 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AL691482.1-201ENST00000453255 87 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC083982.1-201ENST00000485679 344 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC004980.4-201ENST00000513375 203 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 FAM25E-202ENST00000608562 189 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 ABCC13-202ENST00000463099 3842 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 RNA5SP305-201ENST00000362665 119 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 SNORA2.3-201ENST00000383920 135 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 SNORA77-201ENST00000408716 125 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 NPM1P18-201ENST00000434232 732 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 NDUFB4P8-201ENST00000435351 367 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 OR7E125P-201ENST00000443450 846 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 OR52E3P-201ENST00000452083 936 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 RN7SL443P-201ENST00000464331 290 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 AC092324.1-201ENST00000468671 324 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 IGBP1P4-201ENST00000503202 879 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 CR383656.6-201ENST00000550518 394 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 AC105129.1-201ENST00000560250 297 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 AC098935.2-201ENST00000604222 466 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 MAPK10-328ENST00000641553 4009 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 MAPK10-286ENST00000641208 8747 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 ADAM5-202ENST00000399789 1942 ntBASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KIAA1549Q9HCM3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 RNA5SP123-201ENST00000363244 119 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 SNORA48.4-201ENST00000391089 134 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AL645733.1-201ENST00000402250 217 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC114755.2-201ENST00000413520 361 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC104837.2-201ENST00000427236 424 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 BX323845.1-201ENST00000432417 179 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 COX6B1P5-201ENST00000509843 249 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 BTF3P13-201ENST00000513224 490 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 BRD9P1-201ENST00000529855 560 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC103968.1-201ENST00000557841 573 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 EIF3FP1-201ENST00000613970 806 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms