Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.87□□□□□ -1.47
USP29Q9HBJ7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 SNORA5.1-201ENST00000384275 131 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 RANP4-201ENST00000413361 655 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 OR51A6P-201ENST00000418680 1004 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AK4P4-201ENST00000419465 646 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC093155.2-201ENST00000420734 937 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 RPL36AP39-201ENST00000445859 318 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 MYO5BP2-201ENST00000449815 1277 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 YWHAEP1-201ENST00000453697 763 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC026782.2-201ENST00000510845 636 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC093770.1-201ENST00000511559 571 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 OR8Q1P-201ENST00000526467 655 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 HMGN2P36-201ENST00000529541 409 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC027544.3-201ENST00000535082 757 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC093014.1-201ENST00000548926 724 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC005242.1-201ENST00000585658 438 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 BNIP3P38-201ENST00000601117 544 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC068313.1-201ENST00000604028 1008 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC013244.3-201ENST00000605614 388 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 RPL12P48-201ENST00000605620 304 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AP000864.1-201ENST00000609424 650 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 AC020656.2-201ENST00000613291 5309 ntBASIC5.86□□□□□ -1.47
USP29Q9HBJ7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
USP29Q9HBJ7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 RN7SKP185-201ENST00000362813 326 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 RNA5SP326-201ENST00000363209 110 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 AC005042.1-201ENST00000393397 800 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 AL513325.1-201ENST00000417716 1034 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 OR10T1P-201ENST00000424327 947 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 USP12PY-201ENST00000427677 1064 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 BX323845.3-201ENST00000428215 527 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 AC114973.1-201ENST00000429057 632 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 AL606490.7-201ENST00000433136 191 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 LYPLA1P1-201ENST00000434514 622 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.85□□□□□ -1.47
USP29Q9HBJ7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.85□□□□□ -1.47
USP29Q9HBJ7 RPL5P25-201ENST00000441148 775 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms