Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 CASC19-238ENST00000641523 1558 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 RN7SKP104-201ENST00000362605 328 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 Y_RNA.62-201ENST00000362840 99 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 RNU6-1331P-201ENST00000363658 106 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 RNA5SP146-201ENST00000410743 123 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC245060.4-201ENST00000413293 1121 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 NPM1P22-201ENST00000427761 952 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 HMGB3P24-201ENST00000433260 622 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 RPS19P6-201ENST00000441327 433 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 PA2G4P1-201ENST00000442248 1197 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 RPL5P7-201ENST00000444235 813 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 HMGB1P7-201ENST00000450921 612 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AP000547.1-201ENST00000454360 617 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC098847.1-201ENST00000473094 348 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 RPL21P6-201ENST00000479171 504 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 RNU2-45P-201ENST00000516068 187 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 Vault.2-201ENST00000516519 98 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC134698.5-201ENST00000519444 336 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AP000648.1-201ENST00000529682 397 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AL049874.4-201ENST00000557593 255 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 NDUFB4P11-201ENST00000560510 395 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 RN7SL176P-201ENST00000580352 264 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AL031601.1-201ENST00000605702 394 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 RNU6-84P-201ENST00000607737 102 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AC117490.2-201ENST00000610042 594 ntBASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 RN7SKP184-201ENST00000362348 333 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 RNU6-891P-201ENST00000384280 111 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 GAPDHP42-201ENST00000406848 981 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 RN7SKP38-201ENST00000410782 309 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 CBX1P3-201ENST00000413296 527 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC113412.1-201ENST00000425840 504 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 FTLP19-201ENST00000433300 394 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC092601.1-201ENST00000444526 383 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 RSL24D1P2-201ENST00000445584 366 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 GAPDHP25-201ENST00000447061 1001 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC097173.1-201ENST00000505862 819 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 SCARNA16.4-201ENST00000516956 187 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AL512310.9-201ENST00000553311 948 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC007956.1-201ENST00000555623 542 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 WBP1LP11-201ENST00000586141 328 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC087283.1-201ENST00000604029 1074 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 PPATP2-201ENST00000605635 508 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC092266.1-201ENST00000610958 165 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AF117829.2-201ENST00000619538 361 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AC008691.1-209ENST00000642094 814 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 SOCS5P3-201ENST00000425115 1576 ntBASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VIPAS39Q9H9C1 DDX18P6-201ENST00000450119 1997 ntBASIC5.28□□□□□ -1.56
VIPAS39Q9H9C1 RNU1-150P-201ENST00000362491 162 ntBASIC5.28□□□□□ -1.56
VIPAS39Q9H9C1 RNU4-23P-201ENST00000362839 140 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms