Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-500P-201ENST00000362349 107 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 Y_RNA.8-201ENST00000362353 102 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SNORA63.4-201ENST00000362763 126 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SNORA73B-201ENST00000363217 204 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RN7SKP211-201ENST00000363328 315 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RNU4-81P-201ENST00000363561 144 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-280P-201ENST00000364145 104 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RNA5SP205-201ENST00000364653 136 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 Y_RNA.274-201ENST00000364714 101 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RNU4-20P-201ENST00000365601 151 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 Y_RNA.477-201ENST00000384352 108 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-441P-201ENST00000384545 106 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 MIR498-201ENST00000385134 124 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-1109P-201ENST00000391187 107 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SLC25A5P7-201ENST00000406156 896 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RPSAP72-201ENST00000407020 358 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SNORA2C-201ENST00000408564 137 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RNU2-52P-201ENST00000410680 190 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RNU4-55P-201ENST00000410731 137 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RN7SKP29-201ENST00000410957 272 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RN7SKP247-201ENST00000411094 308 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 BCRP8-201ENST00000412037 255 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 UQCRC2P1-201ENST00000417777 1332 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 GAPDHP73-201ENST00000423411 1007 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC005517.2-201ENST00000424673 553 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AL138479.1-201ENST00000426913 484 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC104837.2-201ENST00000427236 424 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 WASF5P-205ENST00000428639 1455 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 IGLV3-4-201ENST00000432300 244 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 NRBF2P3-201ENST00000432731 865 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC093716.1-201ENST00000435923 377 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 HMGB1P45-201ENST00000435986 653 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC011742.2-201ENST00000443818 352 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AL158214.1-201ENST00000444423 404 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RPL21P33-201ENST00000444831 484 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RPL7P12-201ENST00000446719 750 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 PRDX3P3-201ENST00000447765 522 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC019080.2-201ENST00000453859 394 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 MTND4LP30-201ENST00000454092 297 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 PSMC1P13-201ENST00000458195 985 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SNORD127-201ENST00000458892 86 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 SNORA35.1-201ENST00000458908 128 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RPL5P30-201ENST00000465511 891 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RPS20P21-201ENST00000466859 343 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC104966.1-201ENST00000467010 1464 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC114982.1-201ENST00000469402 321 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC087312.1-201ENST00000471411 480 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RN7SL152P-201ENST00000484176 298 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC083904.1-201ENST00000487828 231 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC008040.4-201ENST00000494834 768 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 HIGD1AP14-201ENST00000507617 282 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 AC108078.1-201ENST00000508073 725 ntBASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP4-3Q9BYR4 RPS23-208ENST00000512493 443 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms