Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 AL442128.2-201ENST00000620246 1824 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC073136.1-201ENST00000449426 2884 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 ELOCP3-201ENST00000439303 348 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 OR52E3P-201ENST00000452083 936 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 RPL7P40-201ENST00000481703 745 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 RPS4XP20-201ENST00000505751 772 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 FAM25E-202ENST00000608562 189 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC008833.1-201ENST00000611633 691 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 MIR6839-201ENST00000620425 113 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 AC079298.1-201ENST00000625026 1619 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 CASC19-281ENST00000642118 1554 ntBASIC6.37□□□□□ -1.39
RPAP1Q9BWH6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 OR9G4-201ENST00000302957 984 ntBASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 SNORA56-201ENST00000383966 129 ntBASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 SNORA48.4-201ENST00000391089 134 ntBASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 RPL12P9-201ENST00000412942 488 ntBASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 HMGN2P27-201ENST00000427352 270 ntBASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 PA2G4P6-201ENST00000438325 1197 ntBASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 NOP56P2-201ENST00000447491 769 ntBASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 AC016559.2-201ENST00000510759 359 ntBASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 EIF3KP3-201ENST00000514461 639 ntBASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 AC009027.1-201ENST00000604510 479 ntBASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
RPAP1Q9BWH6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AC011755.1-201ENST00000623763 2049 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 SNURFL-201ENST00000309296 343 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 MTHFD2P5-201ENST00000320415 844 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 RNA5SP87-201ENST00000384155 118 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AC211486.3-201ENST00000412694 621 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AC093162.1-201ENST00000419682 124 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 DDX39BP1-205ENST00000422507 192 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 NPM1P21-201ENST00000513394 762 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AP002373.2-201ENST00000541631 1060 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 PRPF19P1-201ENST00000584766 898 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 FRG1EP-201ENST00000634469 770 ntBASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms