Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC063976.2-201ENST00000425667 3556 ntBASIC5.4□□□□□ -1.55
C9orf72Q96LT7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.4□□□□□ -1.55
C9orf72Q96LT7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf72Q96LT7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf72Q96LT7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf72Q96LT7 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.4□□□□□ -1.55
C9orf72Q96LT7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
C9orf72Q96LT7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
C9orf72Q96LT7 AC100778.3-201ENST00000580060 1750 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 RN7SKP153-201ENST00000365026 316 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 MIR589-201ENST00000385238 99 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 AL050305.1-201ENST00000399993 1230 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 MIR1286-201ENST00000408112 78 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 RN7SKP278-201ENST00000410504 342 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 AP000534.2-201ENST00000412729 568 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 RANP7-201ENST00000418085 644 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 LYPLA1P1-201ENST00000434514 622 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 AL672138.1-201ENST00000450604 1015 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 AL606490.1-201ENST00000452266 765 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 AC006349.1-201ENST00000555526 235 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 MIR1269B-201ENST00000580405 75 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 MIR6837-201ENST00000620884 64 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 AC004808.2-201ENST00000627965 773 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 CDY11P-201ENST00000447168 1651 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 TCP11X1-202ENST00000622971 1372 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 AC023421.1-201ENST00000590535 1785 ntBASIC5.39□□□□□ -1.55
C9orf72Q96LT7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
C9orf72Q96LT7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.38□□□□□ -1.55
C9orf72Q96LT7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 SNORA11B-201ENST00000408175 129 ntBASIC5.38□□□□□ -1.55
C9orf72Q96LT7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 GABARAPL3-201ENST00000412799 354 ntBASIC5.38□□□□□ -1.55
C9orf72Q96LT7 Z93019.1-201ENST00000416450 973 ntBASIC5.38□□□□□ -1.55
C9orf72Q96LT7 SRSF1P1-201ENST00000424058 520 ntBASIC5.38□□□□□ -1.55
C9orf72Q96LT7 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 BRWD1P3-201ENST00000428816 390 ntBASIC5.38□□□□□ -1.55
C9orf72Q96LT7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 COPS8P2-201ENST00000473228 627 ntBASIC5.38□□□□□ -1.55
C9orf72Q96LT7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 AC051619.2-201ENST00000559063 397 ntBASIC5.38□□□□□ -1.55
C9orf72Q96LT7 AC016180.1-201ENST00000567945 403 ntBASIC5.38□□□□□ -1.55
C9orf72Q96LT7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 MTCO1P1-201ENST00000624263 1081 ntBASIC5.38□□□□□ -1.55
C9orf72Q96LT7 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.38□□□□□ -1.55
C9orf72Q96LT7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 CYCSP12-201ENST00000437729 300 ntBASIC5.37□□□□□ -1.55
C9orf72Q96LT7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 HMGB1P44-201ENST00000508597 572 ntBASIC5.37□□□□□ -1.55
C9orf72Q96LT7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 RN7SKP99-201ENST00000517028 307 ntBASIC5.37□□□□□ -1.55
C9orf72Q96LT7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms