Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 TCEA1P1-201ENST00000449716 880 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 RN7SL55P-201ENST00000464534 297 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 RN7SL221P-201ENST00000466190 281 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AL591122.1-201ENST00000487348 492 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 RPL17P2-201ENST00000491913 451 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC023194.1-201ENST00000493084 308 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 RNU4-49P-201ENST00000516080 140 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC011853.1-201ENST00000518911 454 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC008429.4-201ENST00000521201 182 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC083923.1-201ENST00000523708 376 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AP003084.1-201ENST00000524828 742 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 AL109766.1-201ENST00000555080 552 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 SUB1P2-201ENST00000556401 297 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC090236.2-201ENST00000587933 1101 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AP001330.4-201ENST00000604350 154 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC137590.2-201ENST00000619709 240 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC117382.2-201ENST00000564748 3151 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC016582.1-202ENST00000636341 2982 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LRCH3Q96II8 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LRCH3Q96II8 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 EFTUD1P2-201ENST00000514817 1603 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC092447.10-201ENST00000620607 1652 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LRCH3Q96II8 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC087045.3-201ENST00000623046 2468 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LRCH3Q96II8 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LRCH3Q96II8 RNU6-462P-201ENST00000362659 105 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 RNU5E-8P-201ENST00000363502 116 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AL391419.1-201ENST00000398901 1275 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 RPL23AP47-201ENST00000408017 460 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 RN7SKP129-201ENST00000410288 299 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AL355862.1-201ENST00000412705 353 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 MRPL50P2-201ENST00000416821 482 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 RPL7P57-201ENST00000423238 740 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LRCH3Q96II8 Z98752.2-201ENST00000432727 312 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 RNU6-329P-201ENST00000459618 107 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AL445187.1-201ENST00000502685 260 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 GUSBP9-201ENST00000510138 584 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 IGHV7-40-201ENST00000520963 296 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 COPS8P3-201ENST00000526024 482 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC018558.5-201ENST00000565840 952 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC141257.3-201ENST00000572906 215 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC008782.1-201ENST00000603386 430 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 uc_338.29-201ENST00000615099 168 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC233309.1-201ENST00000619522 751 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC073592.6-201ENST00000624271 415 ntBASIC8.18□□□□□ -1.1
LRCH3Q96II8 AC024023.1-201ENST00000624530 922 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms